jvrana / primer3-py-plus
A easy-to-use Python API for Primer3 primer design.
☆15Updated 2 years ago
Alternatives and similar repositories for primer3-py-plus:
Users that are interested in primer3-py-plus are comparing it to the libraries listed below
- Python bindings for the TaxonKit library☆34Updated 3 weeks ago
- Find common blocks and differences between DNA sequences☆40Updated 2 years ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆23Updated last year
- Accurate Typing of Human Leukocyte Antigen (HLA) by Oxford Nanopore Sequencing☆15Updated 7 years ago
- MeShClust2: Application of alignment-free identity scores in clustering long DNA sequences☆14Updated 3 years ago
- Code for detecting genomic island insertions in clades of microbes.☆19Updated last year
- finding conserved regions in highly diverse genomes☆16Updated 5 months ago
- Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.☆20Updated 8 months ago
- GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison☆53Updated 9 months ago
- Nail is an Alignment Inference tooL☆44Updated this week
- A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations☆14Updated last year
- Find Unique genomic Regions☆29Updated 3 weeks ago
- Trimming tool for Oxford Nanopore sequence data☆22Updated 3 years ago
- ☆30Updated 3 years ago
- Add biological annotations to variants in a given VCF file.☆28Updated 3 years ago
- 🍶 Genome assembly with short sequence reads☆25Updated last year
- ☆15Updated 5 years ago
- Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.☆35Updated 4 months ago
- Convert genbank files to a swath of other formats☆14Updated last year
- Simple utility to concatenate .fastq(.gz) files whilst creating a summary of the sequences.☆33Updated last month
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- ☆26Updated 3 years ago
- Bacterial Annotation by Learned Representation of Genes☆54Updated 4 years ago
- ☆23Updated 5 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆31Updated 8 months ago
- Whole Exome/Whole Genome Sequencing alignment pipeline☆28Updated 4 months ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆13Updated last year
- Automatically design multiplex PCR primer pairs for diverse templates☆23Updated 8 months ago
- Universal and efficient core gene phylogeny with Foldseek and ProstT5☆46Updated last week
- Generate unique KMERs for every contig in a FASTA file☆45Updated 2 years ago