mobiusklein / psimsLinks
A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML
☆21Updated 4 months ago
Alternatives and similar repositories for psims
Users that are interested in psims are comparing it to the libraries listed below
Sorting:
- mzSpecLib: A standard format to exchange/distribute spectral libraries☆27Updated last week
- The Multiplierz Proteomics Library☆24Updated last year
- A Python implementation of Baffling Recursive Algorithm for Isotopic distributioN calculations☆21Updated 2 weeks ago
- Democratizing ML in proteomics☆37Updated 2 weeks ago
- Common utilities for parsing and handling peptide-spectrum matches and search engine results in Python☆27Updated last month
- A library for deisotoping and charge state deconvolution of complex mass spectra☆37Updated 3 weeks ago
- Thermo MSFileReader Python bindings☆68Updated 4 years ago
- Matthew The's implementation of MaRaCluster☆11Updated 2 years ago
- A small library to provide peak picking for software processing mass spectrometry data☆23Updated 6 months ago
- Streamlining Mass Spectrometry Data Visualization with Pandas☆14Updated last month
- An open-source Python package to unify raw MS data accession and storage.☆24Updated last month
- Instrument Application Programming Interface☆47Updated 3 months ago
- This repository attempts to implement a neural net that leverages the transformer architecture to predict peptide properties (retention t…☆10Updated 6 months ago
- pyQms, generalized, fast and accurate mass spectrometry data quantification☆28Updated 11 months ago
- ☆25Updated last year
- RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…☆64Updated last year
- A python package for fast post translational modification localization, powered by Cython.☆19Updated last year
- ☆20Updated 3 years ago
- ☆37Updated 2 months ago
- ☆26Updated last year
- Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.☆28Updated 2 weeks ago
- ☆34Updated last week
- ☆16Updated 2 years ago
- ☆19Updated last year
- ProteoBench is an open and collaborative platform for community-curated benchmarks for proteomics data analysis pipelines. Our goal is to…☆46Updated this week
- MS2Query - machine learning assisted library querying of MS/MS spectra☆45Updated 2 weeks ago
- Synthetic mzML writer☆13Updated 2 months ago
- HUPO-PSI mass spectrometry CV☆31Updated last week
- Fast and flexible semi-supervised learning for peptide detection in Python☆44Updated 3 months ago
- A programmable and modular LC/MS simulator in Python☆22Updated this week