pattilab / DecoIDLinks
Metabolomics software for database-assisted deconvolution of MS/MS spectra
☆19Updated 2 years ago
Alternatives and similar repositories for DecoID
Users that are interested in DecoID are comparing it to the libraries listed below
Sorting:
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆30Updated last year
- ☆28Updated 2 years ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- LipidFinder: A computational workflow for discovery of new lipid molecular species☆21Updated 4 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Updated 3 years ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆13Updated last week
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆15Updated 2 years ago
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆28Updated 8 months ago
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Updated last month
- Goslin is the Grammar on succinct lipid nomenclature.☆12Updated 2 months ago
- Shiny app for retention time prediction☆10Updated 2 months ago
- QC systems for metabolomics studies☆11Updated 4 months ago
- Annotation of in source LC/MS data☆12Updated last year
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- Metabolome Annotation Workflow☆26Updated 3 months ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆16Updated 8 years ago
- Tool for reliability assessment of omics peprocessing☆11Updated 3 weeks ago
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆16Updated 2 months ago
- R Interface to the ClassyFire REST API☆12Updated 11 months ago
- Rocker image for metabolomics data analysis☆13Updated 3 months ago
- ☆23Updated 2 weeks ago
- A collection of common mz values found in mass spectrometry.☆20Updated last year
- Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis☆11Updated 9 months ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Updated last year
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆15Updated last month
- NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.☆34Updated 4 years ago
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Updated 3 years ago
- ☆14Updated 3 years ago
- OpenAPI based libraries for different programming languages like R and Python☆18Updated last week
- ☆12Updated last year