Metabolomics software for database-assisted deconvolution of MS/MS spectra
☆20Jan 24, 2024Updated 2 years ago
Alternatives and similar repositories for DecoID
Users that are interested in DecoID are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…☆16Jun 1, 2023Updated 2 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆10Sep 6, 2022Updated 3 years ago
- data processing for MS-based metabolomics☆15Nov 10, 2024Updated last year
- A database of In-Silico predicted MS/MS spectrum of Natural Products☆15Sep 24, 2022Updated 3 years ago
- A set of metabolomics tools for use in Galaxy☆11Sep 2, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Annotation of in source LC/MS data☆12Oct 19, 2024Updated last year
- Nextflow-powered MS-DIAL☆13Mar 26, 2026Updated last month
- MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS☆16Jan 8, 2026Updated 4 months ago
- Goslin is the Grammar on succinct lipid nomenclature.☆13Apr 29, 2026Updated 3 weeks ago
- GC/LC-MS data analysis for environmental science☆17Apr 9, 2026Updated last month
- ☆15Jun 3, 2021Updated 4 years ago
- Convert MSP files into a database☆10May 4, 2021Updated 5 years ago
- Shiny app for retention time prediction☆11Dec 1, 2025Updated 5 months ago
- Repo hosting the MetFrag website☆10Apr 6, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- R Interface to the ClassyFire REST API☆14Updated this week
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆14Apr 13, 2026Updated last month
- Implementation of graph convolutional networks to predict chromatographic retention times.☆15Sep 7, 2021Updated 4 years ago
- Predicting molecular fingerprint from electron−ionization mass spectrum with deep neural networks☆36Mar 21, 2024Updated 2 years ago
- eMetabolomics project: Mass Annotation based on in silico Generated Metabolites☆17Oct 30, 2022Updated 3 years ago
- The similarity score for spectral comparison☆88Mar 5, 2025Updated last year
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Apr 11, 2023Updated 3 years ago
- Metabolomics experimental design, sample metadata configuration, and sample data acquisition.☆11Jun 28, 2018Updated 7 years ago
- Code associated with the manuscript: Deep Neural Networks for Classification of LC-MS Spectral Peaks☆14Jan 11, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- ☆11Feb 20, 2026Updated 3 months ago
- BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)☆19May 12, 2023Updated 3 years ago
- asari, metabolomics data preprocessing☆62May 15, 2026Updated last week
- sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java☆57Aug 1, 2024Updated last year
- Flash entropy search☆17Sep 24, 2023Updated 2 years ago
- a python package for molecular formula analysis in MS-based small molecule studies☆33Jan 28, 2026Updated 3 months ago
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆24Nov 11, 2024Updated last year
- ☆28Nov 30, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- All the source code of MetDNA.☆20Mar 1, 2022Updated 4 years ago
- ☆24Mar 26, 2025Updated last year
- Encoding MS/MS spectra using formula transformers for inferring molecular properties☆77Jun 5, 2024Updated last year
- RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.☆29Jun 4, 2025Updated 11 months ago
- ☆27Mar 20, 2026Updated 2 months ago
- An open-source Python package for efficient accession and visualization of Bruker TimsTOF raw data from the Mann Labs at the Max Planck I…☆95Mar 18, 2026Updated 2 months ago
- pathway and network analysis for metabolomics☆44Dec 8, 2025Updated 5 months ago