Alternatives and similar repositories for DecoID:

Users that are interested in DecoID are comparing it to the libraries listed below

• computational-metabolomics / msPurity
  R-package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆15Updated 8 months ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 2 years ago
• HuanLab / ISFrag
  A bioinformatic tool facilitating automated in-source fragmentation identification
  ☆10Updated 2 years ago
• eMetaboHUB / MS-CleanR
  ☆25Updated last year
• stanstrup / commonMZ
  A collection of common mz values found in mass spectrometry.
  ☆19Updated 7 months ago
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆13Updated last year
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆25Updated last year
• ODonnell-Lipidomics / LipidFinder
  LipidFinder: A computational workflow for discovery of new lipid molecular species
  ☆19Updated 3 years ago
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆13Updated last year
• WMBEdmands / compMS2Miner
  metabolite identification R-package for metabolomic high-resolution LC-MS datasets.
  ☆14Updated 7 years ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆27Updated 6 months ago
• ZhuMetLab / MetDNA2
  Knowledge-guided multilayer network approach is executed in MetDNA2
  ☆14Updated 2 years ago
• ZhuMSLab / DecoMetDIA
  ☆11Updated 2 years ago
• zamboni-lab / SLAW
  Scalable and self-optimizing processing workflow for untargeted LC-MS
  ☆28Updated 5 months ago
• YasinEl / mzRAPP
  Tool for reliability assessment of omics peprocessing
  ☆10Updated 11 months ago
• ipb-halle / MetFragR
  R package for MetFrag
  ☆24Updated 7 years ago
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆10Updated last month
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆23Updated 2 months ago
• vsegurar / DeepMSPeptide
  ☆16Updated 5 years ago
• yufree / xcmsrocker
  Rocker image for metabolomics data analysis
  ☆13Updated this week
• bittremieux-lab / GLEAMS
  GLEAMS is a Learned Embedding for Annotating Mass Spectra.
  ☆22Updated last year
• zmahnoor14 / MAW
  Metabolome Annotation Workflow
  ☆25Updated 10 months ago
• cbroeckl / RAMClustR
  Assigning precursor-product ion relationships in indiscriminant MS/MS data
  ☆12Updated 8 months ago
• shuzhao-li-lab / asari
  asari, metabolomics data preprocessing
  ☆44Updated last week
• zhengfj1994 / MetEx
  MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.
  ☆16Updated last year
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• rformassspectrometry / MetaboAnnotation
  High level functionality to support and simplify metabolomics data annotation.
  ☆15Updated last month
• MatteoLacki / timsr
  TimsR: Easy access to timsTOF Pro data from R.
  ☆9Updated 3 years ago
• MannLabs / alpharaw
  An open-source Python package to unify raw MS data accession and storage.
  ☆18Updated last week
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago