FredHutch / maxquant-pipelineLinks
MaxQuant Automated Pipeline
☆23Updated 5 years ago
Alternatives and similar repositories for maxquant-pipeline
Users that are interested in maxquant-pipeline are comparing it to the libraries listed below
Sorting:
- ☆42Updated 7 years ago
- Converts Ensembl, Uniprot, and HGNC IDs to Entrez Gene Id☆47Updated 2 years ago
- Bioinformatics pipeline for selecting patient-specific cancer neoantigen vaccines☆88Updated 3 months ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆27Updated 7 years ago
- Python interface to running command-line and web-based MHC binding predictors☆99Updated last year
- A BioJS viewer for protein sequence features☆52Updated 3 years ago
- A guide to running MaxQuant in Linux☆35Updated 5 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 3 years ago
- integrated RNA-seq Analysis Pipeline☆84Updated 6 years ago
- IPAW: a Nextflow workflow for proteogenomics☆29Updated last year
- Python biomart API☆69Updated 2 years ago
- Python interface to amino acid properties and IEDB☆57Updated last year
- Graphical user interface for de novo sequencing of tandem mass spectra☆15Updated last year
- A collection of useful functions for bioinformatics data analysis☆24Updated 3 weeks ago
- Docker for MetaboAnalyst 4.0☆24Updated 5 years ago
- Using R and Bioconductor packages for the analysis and comprehension of proteomics data.☆99Updated 4 months ago
- ☆49Updated 3 years ago
- ARCHS4 RNA-seq processing scripts and web server pages.☆61Updated 5 years ago
- DRUGZ software☆25Updated 4 years ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆42Updated last week
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Updated 2 years ago
- Galaxy tools for metabolomics maintained by Workflow4Metabolomics☆30Updated 3 months ago
- 3D hotspot mutation proximity analysis tool☆51Updated 2 years ago
- ☆84Updated last year
- Data Integration tool utilizing network information for predictive analyses☆16Updated 7 months ago
- ☆67Updated last year
- ☆38Updated 2 years ago
- ☆28Updated 3 weeks ago
- B- and T-cell receptor sequence annotation, simulation, clonal family and germline inference, and affinity prediction☆61Updated last week