Alternatives and similar repositories for pyqms

Users that are interested in pyqms are comparing it to the libraries listed below

• MetaSys-LISBP / IsoCor
  IsoCor: Isotope Correction for mass spectrometry labeling experiments
  ☆24Updated 3 months ago
• HUPO-PSI / mzSpecLib
  mzSpecLib: A standard format to exchange/distribute spectral libraries
  ☆27Updated last month
• computational-metabolomics / msPurity
  A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics
  ☆16Updated last year
• mobiusklein / ms_peak_picker
  A small library to provide peak picking for software processing mass spectrometry data
  ☆23Updated 8 months ago
• BlaisProteomics / multiplierz
  The Multiplierz Proteomics Library
  ☆24Updated last year
• RogerGinBer / RHermes
  RHermes is a semi-targeted metabolomics package to deeply characterize biological and environmental samples.
  ☆28Updated 2 months ago
• MatteoLacki / timspy
  ☆20Updated 4 years ago
• bittremieux-lab / falcon
  Large-scale tandem mass spectrum clustering using fast nearest neighbor searching.
  ☆30Updated this week
• xxao / mMass
  Mass Spectrometry Tool
  ☆24Updated last year
• computational-metabolomics / beamspy
  BEAMSpy - Birmingham mEtabolite Annotation for Mass Spectrometry (Python Package)
  ☆18Updated 2 years ago
• OpenMS / pyopenms_viz
  Streamlining Mass Spectrometry Data Visualization with Pandas
  ☆18Updated last week
• EMSL-Computing / CoreMS
  CoreMS is a comprehensive mass spectrometry software framework
  ☆59Updated last month
• frallain / pymsfilereader
  Thermo MSFileReader Python bindings
  ☆69Updated 4 years ago
• griquelme / tidyms
  TidyMS: Tools for working with MS data in untargeted metabolomics
  ☆56Updated last year
• gtluu / timsconvert
  ☆38Updated 4 months ago
• CompOmics / ms2pip
  MS²PIP: Fast and accurate peptide spectrum prediction for multiple fragmentation methods, instruments, and labeling techniques.
  ☆44Updated 4 months ago
• thermofisherlsms / iapi
  Instrument Application Programming Interface
  ☆48Updated 5 months ago
• abdrakhimov1 / Biosaur
  ☆14Updated 3 years ago
• alexandrovteam / curatr
  ☆14Updated 2 years ago
• fickludd / dinosaur
  Feature finding algorithm for detection of isotope patterns in HPLC mass spectrometry data.
  ☆45Updated 3 years ago
• kevinkovalchik / RawTools
  RawTools is an open-source and freely available package designed to perform scan data parsing and quantification, and quality control ana…
  ☆65Updated 2 years ago
• mobiusklein / psims
  A declarative API for writing XML documents for HUPO PSI-MS mzML and mzIdentML
  ☆22Updated 6 months ago
• bittremieux-lab / spectrum_utils
  Python package for efficient mass spectrometry data processing and visualization
  ☆154Updated 4 months ago
• wfondrie / mokapot
  Fast and flexible semi-supervised learning for peptide detection in Python
  ☆47Updated 5 months ago
• HUPO-PSI / ProForma
  HUPO-PSI Standardized peptidoform notation
  ☆20Updated 2 months ago
• wfondrie / ppx
  A Python interface to proteomics data repositories
  ☆34Updated last month
• Villen-Lab / pyAscore
  A python package for fast post translational modification localization, powered by Cython.
  ☆19Updated last year
• iomega / ms2query
  MS2Query - machine learning assisted library querying of MS/MS spectra
  ☆45Updated 2 months ago
• biosustain / pyOpenMS_UmetaFlow
  Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)
  ☆22Updated 8 months ago
• shuzhao-li / mummichog
  pathway and network analysis for metabolomics
  ☆42Updated last year