atc3 / maxquant_linux_guideLinks
A guide to running MaxQuant in Linux
☆35Updated 5 years ago
Alternatives and similar repositories for maxquant_linux_guide
Users that are interested in maxquant_linux_guide are comparing it to the libraries listed below
Sorting:
- R package for analysing proteomics data☆50Updated 2 years ago
- ☆49Updated 3 years ago
- Python package to annotate and visualize gene fusions.☆65Updated last year
- ☆15Updated 3 years ago
- EasyFuse is a pipeline for accurate fusion gene detection from RNA-seq data.☆62Updated 3 months ago
- Versatile FASTA/FASTQ demultiplexer.☆33Updated last year
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Updated 6 years ago
- predicts neoepitopes from phased somatic mutations detected using tumor/normal DNA-seq data☆27Updated 2 years ago
- ☆33Updated 5 years ago
- pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data☆38Updated 4 years ago
- Demultiplexes a fastq.☆48Updated 5 years ago
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆32Updated 2 years ago
- A script to make downloading of SRA/GEO data easier☆33Updated 2 years ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 11 months ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- A list of alternative splicing analysis resources☆46Updated 9 months ago
- Junction centric alternative splicing translator☆21Updated 3 years ago
- ☆20Updated 6 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆24Updated 2 years ago
- direct comparison of circular and linear RNA expression☆23Updated 4 years ago
- documentation for trackViewer☆29Updated 6 years ago
- Integration ribosome profiling - mass spectrometry☆15Updated 2 months ago
- ChIP-Atlas: Browse and analyze all public ChIP/DNase-seq data on your browser☆80Updated 3 weeks ago
- viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data☆28Updated last year
- Motif manipulation functions for R.☆30Updated 3 months ago
- Regression-based annotation of protein-coding sequences from ribosome profiling data☆32Updated 5 years ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆73Updated last month
- Tool for RNA-Seq analysis.☆39Updated 3 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 7 years ago