Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.
☆27Apr 13, 2025Updated last year
Alternatives and similar repositories for docker4seq
Users that are interested in docker4seq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- rCASC: reproducible Classification Analysis of Single Cell Sequencing Data☆16Apr 15, 2025Updated last year
- A suite of regression-based tools for ribosome profiling data analysis☆10Oct 3, 2022Updated 3 years ago
- An unofficial demultiplexing strategy for SPLiT-seq RNA-Seq data☆28Oct 4, 2023Updated 2 years ago
- defusion☆14Aug 24, 2021Updated 4 years ago
- Shiny-Seq: A web based interactive pipeline to analyze RNA-Seq data☆21Apr 24, 2019Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆84Jun 9, 2022Updated 4 years ago
- ☆17May 15, 2024Updated 2 years ago
- lightning☆11Oct 20, 2015Updated 10 years ago
- The Cancer bioMarker Prediction Pipeline (CAMPP)☆19Oct 25, 2020Updated 5 years ago
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆17Jan 4, 2021Updated 5 years ago
- GWAS and rare variants tests at high speed using regenie☆16Feb 18, 2026Updated 5 months ago
- An eXplainable Cell-specific machine learning method to predict clinical Phenotypes using single-cell multi-omics☆15Sep 23, 2025Updated 9 months ago
- Design of single- and multi-stage multi-arm clinical trials☆16Jan 4, 2024Updated 2 years ago
- ☆95Aug 29, 2025Updated 10 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Merge transcriptome read-to-genome alignments into non-redundant transcript models☆20Jan 21, 2026Updated 6 months ago
- Dose response curves and DIP rates for cell proliferation data in Python☆16Jul 13, 2026Updated last week
- ☆11Aug 21, 2018Updated 7 years ago
- Interactive Differential Expression AnaLysis - DE made accessible and reproducible☆33Dec 1, 2025Updated 7 months ago
- An R package for computing the Quaternary Dot Product Scoring Statistic for signed and unsigned causal graphs.☆10Feb 8, 2019Updated 7 years ago
- BISulfite-seq CUI Toolkit☆26Jun 24, 2026Updated 3 weeks ago
- 🔬 R package: Analysis of Large Affymetrix Microarray Data Sets☆12Dec 14, 2025Updated 7 months ago
- R scripts used for MYC analyses☆10Jan 30, 2018Updated 8 years ago
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆62May 17, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Mar 11, 2018Updated 8 years ago
- ImmuneDB - A system for the analysis and exploration of high-throughput adaptive immune receptor sequencing data☆23May 21, 2024Updated 2 years ago
- Code used for biomarker discovery using party (building conditional random forests)☆15May 18, 2018Updated 8 years ago
- A python package for Multiomics and Ecological Spatial Analysis (MESA)☆25Apr 8, 2025Updated last year
- published papers with a lot of data☆75Apr 5, 2025Updated last year
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆24Apr 5, 2023Updated 3 years ago
- Convolutional neural network for categorising prostate cancer from MRI images.☆11Jul 22, 2020Updated 5 years ago
- Mastering Shiny Book Club☆26Feb 5, 2025Updated last year
- ☆54Mar 7, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆16Apr 28, 2025Updated last year
- Higher level repo for aggregating all of Atlas workflow logic for Single Cell☆14Jul 9, 2026Updated last week
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- Human brain, >200,000 nuclei☆25Jun 17, 2021Updated 5 years ago
- Framework for running text mining tools on latest publications. Main page at:☆15Jul 13, 2022Updated 4 years ago
- scFOCAL operates through the integration of drug-response transcriptional consensus signatures (TCSs) derived from the LINCS L1000 datase…☆25Jun 23, 2026Updated 3 weeks ago
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50May 28, 2019Updated 7 years ago