bihealth / scelvisLinks
SCelVis - web-based visualization of single-cell data. Demo
☆21Updated last year
Alternatives and similar repositories for scelvis
Users that are interested in scelvis are comparing it to the libraries listed below
Sorting:
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆74Updated 2 years ago
- Explore the cancer relevance of your gene list☆51Updated 3 months ago
- A R framework for pipeline benchmarking, with application to single-cell RNAseq☆41Updated 3 years ago
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆38Updated 3 years ago
- Dynamic models for single-cell RNA-seq time series.☆40Updated 6 years ago
- a R package to identify neoantigens from NGS data☆19Updated 7 years ago
- Automated cell filtering for single-cell RNA sequencing data☆24Updated last year
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆25Updated last year
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Updated 6 years ago
- ☆43Updated last year
- A collection of project templates and useful functions for single-cell data analysis with Scanpy.☆20Updated 2 years ago
- ☆62Updated 3 months ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆34Updated 4 years ago
- scRNAseq integration with triplet neural networks☆41Updated 2 years ago
- ☆34Updated 6 years ago
- Code and figures accompanying the paper, "Single-cell alternative splicing analysis with Expedition reveals splicing dynamics during neu…☆20Updated 7 years ago
- Experimental design framework for scRNAseq population studies (eQTL and DE)☆45Updated 5 months ago
- Standalone shiny server container for viewing CellChat object☆12Updated 4 years ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆22Updated 10 months ago
- An R/Bioconductor package that implements a single-sample molecular phenotyping approach☆43Updated 7 months ago
- XEnograft Visualization & Analysis☆11Updated 3 months ago
- ☆23Updated last month
- A toolset for analysis and visualisation of Spatial Transcriptomics datasets.☆18Updated 4 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆36Updated last month
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- ☆37Updated 8 years ago
- This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, And…☆15Updated 4 years ago
- 10x single cell RNA-seq data from the developing mouse retina☆16Updated 4 years ago