ncbi / tree-tool
Incremental building of phylogenetic distance trees
☆20Updated this week
Alternatives and similar repositories for tree-tool:
Users that are interested in tree-tool are comparing it to the libraries listed below
- Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation☆103Updated last month
- ☆35Updated last year
- ncbi-vdb☆89Updated this week
- A pipeline that ingests SARS-CoV-2 (i.e. nCoV) data from GISAID and Genbank, transforms it, stores it on S3, and triggers Nextstrain nCoV…☆36Updated last month
- The command-line interface to GGD☆42Updated 2 years ago
- dbGaP data validation tool repo☆13Updated last year
- The BioPerl Web site: http://bioperl.org☆14Updated 5 years ago
- Translation layer between the GDC Data Dictionary and psqlgraph☆28Updated 9 months ago
- NanoDJ: A Dockerized Jupyter Notebook for Interactive Oxford Nanopore MinION Sequence Manipulation and Genome Assembly☆49Updated 5 years ago
- The PomBase community curation tool☆19Updated last week
- ☆14Updated last month
- Utilities for building and managing bioconda recipes☆98Updated 2 weeks ago
- NGS Language Bindings☆118Updated last year
- Bioconda is a distribution of bioinformatics software realized as a channel for the versatile package manager Conda.☆37Updated this week
- NCBI C++ Toolkit package sources☆57Updated this week
- base documentation site for Singularity software☆27Updated 2 years ago
- repo for OBF community newsletter updates☆18Updated 2 weeks ago
- OSIRIS is a public domain quality assurance software package that facilitates the assessment of multiplex short tandem repeat (STR) DNA p…☆26Updated 9 months ago
- A software tool for personalized and allele-specific CRISPR editing.☆17Updated 2 years ago
- Announcements related to ontology changes that may impact groups using GO, such as obsoletions, merges, etc.☆14Updated 2 years ago
- The modern argument parser for c++ tools☆10Updated last month
- ☆103Updated this week
- GenomeWarp translates genetic variants from one genome assembly version to another.☆97Updated last year
- The snakemake interface, currently works like a notebook (under development)☆18Updated 3 years ago
- A pipeline for the analysis of CRISPR edited data. It allows the evaluation of the quality of gene editing experiments using targeted nex…☆35Updated last month
- Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines☆17Updated last month
- Genomic Annotation Logic and Execution System☆9Updated last year
- deploy a snakemake pipeline directly from version control (under development)☆21Updated last month
- A set of CWL tools and workflows used by NCBI Computational Biology Branch for NGS data analysis☆22Updated last year
- An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵☆29Updated last month