Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets
☆24Apr 5, 2023Updated 3 years ago
Alternatives and similar repositories for exceRpt
Users that are interested in exceRpt are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- COMPSRA: a COMprehensive Platform for Small RNA-Seq data Analysis☆17Jan 4, 2021Updated 5 years ago
- ☆13Jan 15, 2021Updated 5 years ago
- A flexible framework for nucleosome profiling of cell-free DNA☆31Jul 27, 2023Updated 2 years ago
- ☆21Oct 27, 2023Updated 2 years ago
- NGS perl modules☆10Jul 13, 2026Updated last week
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Comprehensive analysis of small RNA sequencing data☆35May 14, 2025Updated last year
- Collection of fragmentomic analysis scripts☆14Jul 3, 2024Updated 2 years ago
- exRNA Biomarker Discovery for Liquid Biopsy☆11Oct 29, 2020Updated 5 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆16Jul 7, 2026Updated 2 weeks ago
- ☆11Jun 14, 2023Updated 3 years ago
- Official code repository for JAX-CNV☆14Jan 16, 2020Updated 6 years ago
- Snakemake workflow for somatic mutation detection without matched normal samples☆13Mar 4, 2023Updated 3 years ago
- Scripts and samples for using Grid Engine on Google Cloud Platform.☆13Aug 2, 2017Updated 8 years ago
- Tumor Immune Single-cell Hub☆23Aug 13, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Validating glioblastoma immune cell immunohistochemsitry using computational deconvolution of TCGA tumors☆14Jul 10, 2019Updated 7 years ago
- BRIE: Bayesian Regression for Isoform Estimate in Single Cells☆43Jun 17, 2024Updated 2 years ago
- Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.☆87Jul 12, 2023Updated 3 years ago
- CONICS: COpy-Number analysis In single-Cell RNA-Sequencing☆77Feb 27, 2023Updated 3 years ago
- A small-RNA sequencing analysis pipeline☆101Jul 14, 2026Updated last week
- Transcriptomic tools to classify bladder tumours according to six published molecular classifications : Baylor, UNC, MDA, Lund, CIT-Curie…☆28Dec 21, 2022Updated 3 years ago
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆24Jan 26, 2026Updated 5 months ago
- ☆39Apr 21, 2026Updated 3 months ago
- R package for CRAG☆12Feb 17, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Software for preprocessing, filtering, alignment, and reporting of smallRNA-seq datasets☆20Jan 13, 2021Updated 5 years ago
- Working example of snakemake tutorial using UAB Cheaha computing cluster via SLURM scheduler☆10Nov 8, 2018Updated 7 years ago
- Bioinformatic tools (R scripts) for the analysis of Absolute Quantification of Architecture (AQuA-HiChIP) style data.☆12Sep 12, 2025Updated 10 months ago
- An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice☆11Jun 5, 2023Updated 3 years ago
- Materials for GCB535 at Penn.☆21Apr 19, 2019Updated 7 years ago
- A fork of Mini vMac 36.04 (https://www.gryphel.com/c/minivmac/index.html) that focuses on SDL 2 and Emscripten.☆15Nov 6, 2018Updated 7 years ago
- Chemical Similarity Enrichment analysis of metabolomics datasets☆32Jul 19, 2024Updated 2 years ago
- ☆10Sep 14, 2023Updated 2 years ago
- ☆19Feb 23, 2022Updated 4 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- Combined clonality and transcriptome scRNAseq clustering method☆11Dec 3, 2022Updated 3 years ago
- R Interface to the ClassyFire REST API☆15May 20, 2026Updated 2 months ago
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 4 years ago
- R tools for Agilent electrophoresis data☆50Jul 21, 2023Updated 3 years ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Jul 7, 2016Updated 10 years ago
- ☆14Dec 15, 2019Updated 6 years ago