BISulfite-seq CUI Toolkit
☆30Oct 5, 2026Updated last week
Alternatives and similar repositories for biscuit
Users that are interested in biscuit are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code to reproduce "Detecting liver cancer using cell-free DNA fragmentomes☆11Nov 18, 2022Updated 3 years ago
- ☆19Feb 20, 2018Updated 8 years ago
- BISulfite-seq CUI Toolkit☆70Jul 18, 2026Updated 2 months ago
- A collection of tools to deal with Bisulfite-seq/NOMe-seq (SNP/Methylation calling: BisSNP; HMM segmentation: DMNTools; Visualization/Clu…☆32May 11, 2026Updated 5 months ago
- ☆15Jun 27, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Read level DNA methylation analysis of bisulfite converted sequencing data☆20Feb 23, 2026Updated 7 months ago
- Methylation analysis pipeline for genome graph☆16May 25, 2025Updated last year
- A (mostly) universal methylation extractor for BS-seq experiments.☆182Updated this week
- TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data☆30May 5, 2023Updated 3 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆11Oct 1, 2026Updated 2 weeks ago
- Updated and optimized fork of BSMAP☆24Dec 28, 2020Updated 5 years ago
- ☆59Mar 9, 2022Updated 4 years ago
- Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq☆15Aug 26, 2026Updated last month
- ☆10Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- a parallel R package for detecting copy-number alterations from short sequencing reads☆24Jul 15, 2021Updated 5 years ago
- ☆57Jan 4, 2023Updated 3 years ago
- CoRAL: Reconstruction of focal amplifications with long reads☆31Oct 8, 2026Updated last week
- A python wrapper around SURVIVOR☆20Feb 15, 2024Updated 2 years ago
- ☆16Jan 15, 2025Updated last year
- Find CNVs in single cell sequencing data.☆22Apr 4, 2026Updated 6 months ago
- ☆25Jan 18, 2022Updated 4 years ago
- R package for DNA methylation analysis☆21Oct 2, 2026Updated last week
- Python module for parsing, writing, aligning, and manipulating glycan structrures☆10Oct 7, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆23Sep 1, 2026Updated last month
- ☆22Dec 17, 2020Updated 5 years ago
- V'DJer - B Cell Receptor Repertoire Reconstruction from short read mRNA-Seq data☆29Aug 9, 2022Updated 4 years ago
- Microsatellite Instability (MSI) detection using high-throughput sequencing data.☆117Apr 2, 2025Updated last year
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆199Apr 19, 2026Updated 5 months ago
- ☆33Mar 5, 2024Updated 2 years ago
- Detect and phase minor SNVs from long-read sequencing data☆14Dec 28, 2021Updated 4 years ago
- A segmentation approach to analyze DNA methylation patterns and identify differentially methylation regions from whole-genome datasets☆22Sep 3, 2026Updated last month
- CWL for GDC DNASeq workflows☆24Sep 27, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- code for 'Cell Types of Origin of the Cell Free Transcriptome' by Vorperian et al☆20Feb 22, 2022Updated 4 years ago
- A/B compartments for 12 cancer types estimated from TCGA methylation data☆20Jan 18, 2017Updated 9 years ago
- Tools for analyzing DNA methylation data☆48May 18, 2026Updated 4 months ago
- BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.☆29Jul 5, 2019Updated 7 years ago
- 🍪 SEnsible Step-wise Analysis of DNA MEthylation BeadChips☆84Updated this week
- DCC/DAC methylation pipeline source☆56Jul 29, 2020Updated 6 years ago
- methtuple is a methylation caller for methylation events that co-occur on the same DNA fragment from high-throughput bisulfite sequencing…☆16Apr 5, 2022Updated 4 years ago