ELELAB / CAncer-bioMarker-Prediction-Pipeline-CAMPPLinks
The Cancer bioMarker Prediction Pipeline (CAMPP)
☆17Updated 5 years ago
Alternatives and similar repositories for CAncer-bioMarker-Prediction-Pipeline-CAMPP
Users that are interested in CAncer-bioMarker-Prediction-Pipeline-CAMPP are comparing it to the libraries listed below
Sorting:
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆13Updated last week
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated 3 months ago
- Gene orthologs for model organisms in a tidy data format☆14Updated 3 years ago
- R/Shiny package for network-integrated pathway enrichment analysis☆13Updated 5 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆14Updated 3 years ago
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 9 months ago
- Core utilities for single-cell RNA-seq☆12Updated 9 months ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Updated 3 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Updated 5 years ago
- Survival Analysis for Protein-Level TCGA Analysis☆11Updated 7 years ago
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆23Updated last year
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- Multi-omics data normalisation, model fitting and visualisation.☆28Updated 2 years ago
- Bioinformatics course (WSBIM1322)☆17Updated last week
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆15Updated 8 months ago
- Generate Novel Insights from Gene Correlation Data☆12Updated 3 years ago
- R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.☆16Updated 4 months ago
- ☆27Updated 7 months ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated last week
- rbioapi: User-Friendly R Interface to Biologic Web Services' API☆22Updated 2 months ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 9 months ago
- ☆12Updated 7 years ago
- ☆15Updated 2 years ago
- Annotation of mutated peptide sequences with published or novel potential neoantigen descriptors☆33Updated 10 months ago
- Open-Source Software for Omic Data Analysis and Visualization☆40Updated this week
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆28Updated last year
- Interactive tool for Phosphoproteomics☆13Updated 5 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- 1000 Genomes Project Metadata R Package☆20Updated 2 months ago