ELELAB / CAncer-bioMarker-Prediction-Pipeline-CAMPPLinks
The Cancer bioMarker Prediction Pipeline (CAMPP)
☆17Updated 4 years ago
Alternatives and similar repositories for CAncer-bioMarker-Prediction-Pipeline-CAMPP
Users that are interested in CAncer-bioMarker-Prediction-Pipeline-CAMPP are comparing it to the libraries listed below
Sorting:
- A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics☆12Updated last year
- Gene orthologs for model organisms in a tidy data format☆14Updated 2 years ago
- Extracting mutational signatures via LASSO. The manuscript of the method is published on PLOS Computational Biology and available at: htt…☆11Updated 4 months ago
- Core utilities for single-cell RNA-seq☆12Updated 4 months ago
- Multi-omics data normalisation, model fitting and visualisation.☆26Updated 2 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- FUNctional toolKIt platform for multi-omic functional analysis. An standardised pipeline to analysis transcriptomic, proteomic, phospho…☆13Updated 3 years ago
- R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases☆22Updated 9 months ago
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆14Updated 4 months ago
- R/Shiny package for network-integrated pathway enrichment analysis☆14Updated 4 years ago
- Network annotation visualization☆18Updated 3 months ago
- Open-Source Software for Omic Data Analysis and Visualization☆35Updated this week
- A Shiny web server for interactive visualization and analysis of RNA-seq data☆22Updated 4 years ago
- R tool to analyse and integrate multiple -omics data☆13Updated 2 months ago
- Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…☆14Updated 3 months ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆31Updated 3 weeks ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆16Updated 3 years ago
- ☆25Updated 2 months ago
- Targeted and non-targeted anticancer drugs and drug regimens☆29Updated 3 weeks ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- 🐶 hlabud: HLA genotype analysis in R☆16Updated 4 months ago
- NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization☆32Updated 5 years ago
- R interface to Chemical Translation Service (CTS)☆16Updated last year
- VirusScan Pipeline☆11Updated 6 months ago
- R functions for automation of biomarker discovery based on processing downstream of large LC-MS datasets from any peak picking software☆10Updated 8 years ago
- ESTIMATE tumor infiltration, the tidy way☆16Updated 2 years ago
- digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data☆13Updated 9 months ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆14Updated last week
- Exploration of Omics data☆25Updated 4 years ago
- Focused multi-day workshop covering the material needed for a successful RNA-Seq experiment.☆16Updated 6 years ago