Alternatives and similar repositories for aroma.affymetrix

Users that are interested in aroma.affymetrix are comparing it to the libraries listed below

• CancerRxGene / gdscIC50
  An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.
  ☆28Updated 2 years ago
• OSU-BMBL / IRIS
  A Shiny web server for interactive visualization and analysis of RNA-seq data
  ☆22Updated 4 years ago
• pachterlab / BBB
  Bioinformatics for Benched Biologists
  ☆22Updated 5 years ago
• dwgoon / nezzle
  Network Visualization using both GUI and Programming
  ☆29Updated 5 months ago
• kendomaniac / docker4seq
  Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.
  ☆26Updated 7 months ago
• chess-genome / chess
  Comprehensive Human Expressed SequenceS
  ☆18Updated 4 months ago
• ocbe-uio / DIscBIO
  A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics
  ☆13Updated 2 years ago
• stephaniehicks / methylCC
  R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms
  ☆18Updated 3 years ago
• waldronlab / curatedTCGAData
  Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects
  ☆43Updated 2 weeks ago
• andreaskapou / scMET
  Bayesian modelling of DNA methylation heterogeneity at single-cell resolution
  ☆23Updated last year
• ELELAB / MoonlightR
  ☆17Updated last year
• mkanai / grimon
  R package for plotting 3D graphical visualization of multi-omics data.
  ☆23Updated 3 years ago
• waldronlab / PublicDataResources
  Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using…
  ☆15Updated 6 months ago
• ConesaLab / MultiPower
  Statistical power studies for multi-omics experiments.
  ☆32Updated 9 months ago
• opentargets / genetics-gold-standards
  GWAS gold standards repository
  ☆39Updated last year
• ibn-salem / sevenC
  7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs
  ☆13Updated last month
• KaiAragaki / tidyestimate
  ESTIMATE tumor infiltration, the tidy way
  ☆17Updated 2 years ago
• yan-cri / DEApp
  DEAPP shiny App
  ☆30Updated 3 years ago
• slowkow / cellguide
  🧭 Navigate single-cell RNA-seq datasets in your web browser.
  ☆29Updated 2 years ago
• immcore / iS-CellR
  iS-CellR: interactive graphical tool for analysis of single-cell RNAseq data
  ☆24Updated 6 years ago
• elyadlezmi / RNA2CM
  Pipeline for the identification of cancer-related mutations from RNA-seq data
  ☆14Updated 4 years ago
• sigven / oncoEnrichR
  Explore the cancer relevance of your gene list
  ☆52Updated last month
• lkmklsmn / insct
  scRNAseq integration with triplet neural networks
  ☆41Updated 2 years ago
• csoneson / NativeRNAseqComplexTranscriptome
  Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"
  ☆19Updated 6 years ago
• waldronlab / TCGAutils
  Toolbox package for organizing and working with TCGA data
  ☆28Updated this week
• waldronlab / SingleCellMultiModal
  Single Cell multimodal data scripts for downloading datasets
  ☆17Updated 2 weeks ago
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 4 years ago
• interactivereport / xOmicsShiny
  xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …
  ☆34Updated this week
• Bioconductor / ExperimentHub
  Client to access ExperimentHub resources
  ☆11Updated 2 weeks ago
• BennyStrobes / Watershed
  Prioritization of functional rare genetic variants by integrating genomic annotations and RNA-seq
  ☆18Updated 2 years ago