petergroth / FLOPLinks
This is the official code repository for the paper FLOP: Tasks for Fitness Landscapes Of Protein wildtypes by Groth et al.
☆22Updated 2 years ago
Alternatives and similar repositories for FLOP
Users that are interested in FLOP are comparing it to the libraries listed below
Sorting:
- ☆28Updated 9 months ago
- A thin wrapper around ProteinMPNN for convenient sampling without having to write out or consume files☆11Updated last year
- This repository implements Gibbs sampling with Graph-based Smoothing☆39Updated last year
- A conditionally adapted protein language model for the generation of enzymes☆23Updated 9 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35Updated last year
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆33Updated 10 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆52Updated 3 months ago
- Predicting mutational effects on protein binding from folding energy. ICML 2025.☆28Updated last month
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆43Updated 9 months ago
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆20Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆80Updated last year
- Efficient implementation of the IPA module.☆29Updated last month
- Code for humanization of antibody and nanobody☆52Updated 3 weeks ago
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- This repository contains a set of scripts for performing singular value decomposition on protein multiple sequence alignments, and analyz…☆11Updated last year
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆47Updated 8 months ago
- ☆15Updated last year
- Extension of ThermoMPNN for double mutant predictions☆43Updated last month
- ☆29Updated last month
- ☆23Updated last week
- protein structure generation with sparse all-atom denoising models☆36Updated last month
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- ☆65Updated 2 years ago
- ☆34Updated last week
- ☆13Updated 4 months ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆16Updated last month
- FrameDiPT: an SE(3) diffusion model for protein structure inpainting☆56Updated last year
- This is the official code repository for the paper NeurIPS 2024 spotlight paper "Kermut: Composite kernel regression for protein variant …☆34Updated last month
- ☆29Updated 11 months ago
- ☆38Updated last year