FINCHES (First-principle Interactions via CHEmical Specificity) - Python package for predicting chemically-specific molecular interactions for IDRs
☆49May 20, 2026Updated last month
Alternatives and similar repositories for finches
Users that are interested in finches are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Next generation sequence parameter library for proteins☆41Jun 9, 2026Updated 3 weeks ago
- ☆19Apr 7, 2025Updated last year
- A machine learning based protein disorder predictor.☆31May 19, 2026Updated last month
- COSMO: COarse-grained Simulation of intrinsically disordered prOteins with openMM☆15Jun 10, 2026Updated 3 weeks ago
- AlphaFold version that is extended to integrate diversity parameters for massive sampling.☆17May 4, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆33Mar 2, 2026Updated 3 months ago
- Transfer learning for Mutation Effect Prediction☆17Feb 13, 2024Updated 2 years ago
- Official repo of the Biomeccanica Multiscala course (prof. Marco A. Deriu) - Master Degree in Biomedical engineering, Politecnico di Tori…☆12Jan 2, 2025Updated last year
- Source code for "Nucleosome plasticity is a critical element of chromatin liquid–liquid phase separation and multivalent nucleosome inter…☆13Jun 17, 2022Updated 4 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- Learning the language of protein-protein interactions☆150Jun 15, 2026Updated 2 weeks ago
- bakerlab pymol scripts☆27Feb 6, 2020Updated 6 years ago
- Screen interactions with AlphaFold Multimer☆15Mar 10, 2025Updated last year
- ML toolset for creating TED: The Encyclopedia of Domains☆28May 29, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆48Mar 7, 2026Updated 3 months ago
- UCBShift is a program for predicting chemical shifts for backbone atoms and β-carbon of a protein in solution. It utilizes a machine lear…☆27Apr 9, 2026Updated 2 months ago
- Structure-Informed Protein Language Model☆38Feb 15, 2024Updated 2 years ago
- ☆10Jan 22, 2026Updated 5 months ago
- Protein stability prediction using rewired protein generative models☆85May 26, 2026Updated last month
- ☆26May 19, 2024Updated 2 years ago
- ☆92Mar 31, 2026Updated 3 months ago
- Pipeline to calculate icSHAPE score in genome with sliding window strategy☆13Aug 23, 2022Updated 3 years ago
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆32Aug 10, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Metal and Water prediction☆14Feb 5, 2025Updated last year
- An end-to-end computational pipeline for large Perturb-seq screens☆15Apr 25, 2025Updated last year
- Emending Alignment of Spliced Transcript Reads☆12Jan 19, 2026Updated 5 months ago
- Machine learning pipeline for meta-prediction of coronary artery disease☆17Apr 16, 2025Updated last year
- CLIP-based model for aligning epitopes to immune receptors☆10Apr 30, 2025Updated last year
- ☆27Oct 22, 2025Updated 8 months ago
- ☆50Sep 25, 2024Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆46May 22, 2025Updated last year
- ☆27Jul 3, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- STARLING - conSTruction of intrinsicAlly disoRdered proteins ensembles efficientLy vIa multi-dimeNsional Generative models☆69Jun 4, 2026Updated 3 weeks ago
- R Interface to the Metabolights REST API☆11Jun 10, 2026Updated 3 weeks ago
- This repository houses all the scripts and notebooks utilized for generating, analyzing, and validating the mdCATH dataset. Some user ex…☆62Dec 16, 2025Updated 6 months ago
- PyTorch Implementation of Global Neuron Shape Reasoning with Point Affinity Transformers☆14Mar 16, 2026Updated 3 months ago
- Position-wise analysis of sequencing and genomics data☆41Jul 6, 2023Updated 2 years ago
- DOLPHIN: Advances Single-cell RNA-seq Analysis Beyond Gene-Level by Integrating Exon-Level Quantification and Junction Reads with Deep Ne…☆14Jul 16, 2025Updated 11 months ago
- ☆135May 18, 2026Updated last month