A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
☆99Aug 29, 2023Updated 3 years ago
Alternatives and similar repositories for af2_conformations
Users that are interested in af2_conformations are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆194Oct 7, 2025Updated last year
- ☆121Dec 7, 2022Updated 3 years ago
- A series of scripts that facilitate the prediction of user-defined protein structural properties using AlphaFold2☆12Aug 28, 2023Updated 3 years ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆90Apr 21, 2026Updated 6 months ago
- Code for ColabDock paper☆159May 1, 2025Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆73Feb 13, 2026Updated 8 months ago
- Structure prediction of alternative protein conformations☆86Feb 24, 2025Updated last year
- ☆50Apr 12, 2024Updated 2 years ago
- ☆17Aug 20, 2024Updated 2 years ago
- ☆46Jan 10, 2024Updated 2 years ago
- DockQ is a single continuous quality measure for Protein, Nucleic Acids and Small Molecule Docking Models☆433Feb 26, 2026Updated 8 months ago
- Modelling protein conformational landscape with Alphafold☆62Oct 1, 2026Updated last month
- ☆88Oct 14, 2026Updated 3 weeks ago
- Making Protein Design accessible to all via Google Colab!☆948Oct 14, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ultra-fast in-silico structure mutation☆37Apr 9, 2025Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Aug 10, 2023Updated 3 years ago
- Structure-conditioned masked language modeling for protein sequence design☆75Jan 31, 2024Updated 2 years ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆73Apr 13, 2026Updated 6 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆44May 15, 2024Updated 2 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- A Python Package for Protein Dynamics Analysis☆561Oct 4, 2026Updated last month
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆177Sep 8, 2024Updated 2 years ago
- Code for our paper "Protein sequence design with a learned potential"☆81Sep 8, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A unified and modular interface to homology modelling software☆12Sep 27, 2023Updated 3 years ago
- A collection of *fold* tools☆303Aug 8, 2025Updated last year
- Protein hallucination and inpainting with RoseTTAFold☆284Mar 30, 2023Updated 3 years ago
- ☆75Feb 13, 2026Updated 8 months ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 11 months ago
- NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model☆337Oct 6, 2025Updated last year
- Diffusion-based all-atom protein generative model.☆238Aug 27, 2025Updated last year
- ☆144Jun 3, 2025Updated last year
- ☆214Apr 21, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Mar 22, 2024Updated 2 years ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆83Aug 27, 2021Updated 5 years ago
- Cryptic pocket prediction using AlphaFold 2☆25Nov 27, 2022Updated 3 years ago
- ColabFold protocol☆62Oct 17, 2024Updated 2 years ago
- ☆37Oct 16, 2024Updated 2 years ago
- Protein folding in Pymol☆149Oct 25, 2026Updated last week
- Making Protein folding accessible to all!☆2,977Oct 25, 2026Updated last week