RomeroLab / RLXFLinks
Consolidated repository to perform RLXF
☆32Updated 3 months ago
Alternatives and similar repositories for RLXF
Users that are interested in RLXF are comparing it to the libraries listed below
Sorting:
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆34Updated 8 months ago
- Template-based protein design with Raygun☆71Updated 3 weeks ago
- ☆21Updated 10 months ago
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆21Updated this week
- Protein Design by Machine Learning guided Directed Evolution☆44Updated 4 months ago
- ☆70Updated 5 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆83Updated 2 months ago
- Generative diverse protein backbones by protein language model☆33Updated 8 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 3 months ago
- ☆83Updated last week
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆62Updated 6 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆80Updated 2 weeks ago
- Metrics for our protein design competitions.☆35Updated 9 months ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆29Updated last year
- Directed evolution of proteins in sequence space with gradients☆87Updated last year
- Adapting protein language models for structure-conditioned design☆40Updated last year
- Official repository of EnzymeFlow☆93Updated 8 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 5 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated 2 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆38Updated 2 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆31Updated last year
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆59Updated last month
- dMaSIF implementation for google colab☆32Updated 2 years ago
- ☆28Updated last year
- ☆66Updated 10 months ago
- Structure prediction of alternative protein conformations☆77Updated 6 months ago
- PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.☆30Updated 2 years ago
- protein structure generation with sparse all-atom denoising models☆35Updated 3 weeks ago
- Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.☆26Updated last year
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆110Updated 3 months ago