dtrain16 / NGS-scriptsLinks
Scripts for next generation sequencing analyses
☆15Updated last month
Alternatives and similar repositories for NGS-scripts
Users that are interested in NGS-scripts are comparing it to the libraries listed below
Sorting:
- An R package for plotting GWAS results from the GAPIT package☆14Updated 2 months ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Updated 2 years ago
- Data visualization with R☆12Updated 4 years ago
- ggplot2-based Manhattan plot☆12Updated 3 years ago
- A collection of scripts to run GWAS, regional, gene-oriented, or per-variant analyses.☆18Updated last year
- Readme☆10Updated 5 years ago
- bioinformatics learning☆12Updated 2 years ago
- RNAseq analysis with Hisat2, stringtie, and ballgown☆17Updated 6 years ago
- ☆12Updated 4 years ago
- shared scripts in Lu Lab @ Tsinghua University☆14Updated 7 years ago
- This is a repository to help make plots similar to Figure 2 in https://www.biorxiv.org/content/10.1101/388165v3☆13Updated 6 years ago
- Fine-mapping with infinitesimal effects☆20Updated 6 months ago
- a bucket of bioinformatics scripts☆13Updated this week
- Example for TWAS☆12Updated 3 years ago
- RNA-seq analysis scripts☆15Updated last month
- R package for processing of GWAS output☆16Updated last year
- Fast manhattenplots using ggplot2☆13Updated last year
- Scripts for bioinformatics data processing and analysis☆12Updated 2 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Updated 6 years ago
- PredictDB Pipeline for GTEx v7 data☆17Updated 3 years ago
- A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies☆16Updated last month
- Scripts for plotting figures and running analysis throughout the manuscript☆11Updated 4 years ago
- Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.☆20Updated 3 months ago
- GCEN: an easy-to-use toolkit for Gene Co-Expression Network analysis and lncRNAs annotation☆21Updated 3 years ago
- ☆12Updated 3 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Updated 2 years ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Updated last year
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆14Updated 3 years ago
- ☆21Updated last year
- ☆18Updated last year