yjx1217 / LRSDAYLinks
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
☆34Updated last year
Alternatives and similar repositories for LRSDAY
Users that are interested in LRSDAY are comparing it to the libraries listed below
Sorting:
- ☆45Updated 9 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated last year
- Long Reads Annotation pipeline☆72Updated 3 years ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 9 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- Genome Scripts used in fungal comparative genomics☆66Updated 5 years ago
- Simple pileup-based variant caller☆95Updated 8 months ago
- A program to call variants from genome alignment☆81Updated 8 months ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆48Updated this week
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- Error correction of ONT transcript reads☆58Updated 2 years ago
- Show pangenome graphs in an easy way☆57Updated 5 months ago
- Mapping pipeline for data generated using Arima-HiC☆81Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆76Updated 4 years ago
- finshingTool☆54Updated 9 years ago
- Structural variant caller for real-time long-read sequencing data☆61Updated 3 years ago
- Call select base modifications in PacBio HiFi reads☆15Updated 2 months ago
- ☆78Updated 5 years ago
- Transcripts annotation and GO enrichment Fisher tests☆27Updated 2 years ago
- ☆68Updated 2 weeks ago
- Synteny Imager☆65Updated last month
- meta-pipeline for repetitive element de-fragmentation and annotation☆28Updated 5 years ago
- A pipeline for isoseq☆23Updated 7 years ago
- Genome Annotation Without Nightmares☆46Updated 11 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- ☆83Updated 10 months ago
- Python package and CLI for whole-genome duplication related analyses. **This package is deprecated in favor of** https://github.com/heche…☆86Updated 2 weeks ago
- Transposable element polymorphism identification☆34Updated 5 years ago