yjx1217 / LRSDAYLinks
LRSDAY: Long-read Sequencing Data Analysis for Yeasts
☆31Updated last year
Alternatives and similar repositories for LRSDAY
Users that are interested in LRSDAY are comparing it to the libraries listed below
Sorting:
- Long Reads Annotation pipeline☆72Updated 3 years ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 7 months ago
- Error correction of ONT transcript reads☆58Updated last year
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- Synteny Imager☆63Updated 2 weeks ago
- ☆44Updated 8 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆58Updated 2 years ago
- Mapping pipeline for data generated using Arima-HiC☆79Updated last year
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 2 weeks ago
- Genome Annotation Without Nightmares☆46Updated 6 months ago
- Genome Scripts used in fungal comparative genomics☆67Updated 4 years ago
- A software to assemble chloroplast and mitochodrial genomes using PacBio data☆40Updated 5 years ago
- ☆63Updated 2 weeks ago
- Call select base modifications in PacBio HiFi reads☆10Updated 6 months ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Simple pileup-based variant caller☆91Updated 3 months ago
- Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.☆54Updated 9 months ago
- Transcripts annotation and GO enrichment Fisher tests☆26Updated 2 years ago
- A (very) simple script to QC Hi-C data.☆26Updated 7 months ago
- ☆81Updated 5 months ago
- Structural variant caller for real-time long-read sequencing data☆57Updated 2 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆101Updated 4 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- ☆71Updated 5 years ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆108Updated last month
- Show pangenome graphs in an easy way☆56Updated last week