Alternatives and similar repositories for bsub

Users that are interested in bsub are comparing it to the libraries listed below

• gladkia / igvR
  An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser
  ☆46Updated last year
• beroukhim-lab / BISCUT-py3
  ☆12Updated last year
• davemcg / awesome_genome_browsers
  ☆10Updated 6 years ago
• LieberInstitute / megadepth
  R interface to megadepth: BigWig and BAM related utilities
  ☆12Updated 11 months ago
• MathOnco / EvoFreq
  Evolutionary frequency visualization tool of temporal data
  ☆23Updated 3 years ago
• CompEpigen / methrix
  An R for fast and flexible DNA methylation analysis
  ☆35Updated last week
• AlexandrovLab / SigProfilerMatrixGeneratorR
  R wrapper for utilizing the SigProfilerMatrixGenerator framework
  ☆20Updated 2 years ago
• jokergoo / gtrellis
  Genomic plot in trellis layout
  ☆41Updated last year
• kauralasoo / wiggleplotr
  A small R package to make sequencing read coverage plots in R.
  ☆40Updated last month
• thelovelab / fishpond
  Differential expression and allelic analysis, nonparametric statistics
  ☆30Updated 11 months ago
• lpantano / DEGreport
  Create a cromphensive report of DEG list coming from any analysis of RNAseq data
  ☆26Updated last month
• mikelove / asthma
  RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)
  ☆19Updated 8 years ago
• annaquaglieri16 / varikondo
  R package to organise and standardise your genomic variant calls obtained with different callers.
  ☆11Updated 6 years ago
• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated last year
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆31Updated last week
• AlexandrovLab / TMB_plotter
  Python function for TMB snake plots
  ☆16Updated 5 years ago
• Bioconductor / BiocWorkshops2019
  The official repository of the Bioconductor 2019 Conference Workshops
  ☆24Updated 2 years ago
• gosling-lang / grosling
  R interface to 'Gos'
  ☆39Updated 2 years ago
• caravagnalab / CNAqc
  Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation
  ☆24Updated 2 months ago
• BIMSBbioinfo / pigx_rnaseq
  Bulk RNA-seq Data Processing, Quality Control, and Downstream Analysis Pipeline
  ☆20Updated 11 months ago
• csoneson / compcodeR
  ☆12Updated last month
• Kuanhao-Chao / RNASeqR
  📊 An R package of RNA-seq workflow
  ☆15Updated 3 years ago
• stephenslab / gtexresults
  Code and data resources accompanying Urbut et al (2017), "Flexible statistical methods for estimating and testing effects in genomic stud…
  ☆24Updated 2 years ago
• stephenturner / msigdf
  Molecular Signatures Database (MSigDB) in a data frame
  ☆16Updated 7 years ago
• MonashBioinformaticsPlatform / varistran
  R package providing Variance Stabilizing Transformations appropriate for RNA-Seq data
  ☆21Updated 6 months ago
• seandavi / MachineLearningIntro
  Machine learning use cases for teaching
  ☆13Updated 8 years ago
• bernatgel / regioneR
  An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
  ☆13Updated 6 months ago
• multimeric / TidyMultiqc
  Converts 'MultiQC' Reports into Tidy Data Frames
  ☆18Updated last year
• mskcc / facets2n
  Algorithm to implement Fraction and Allelic Copy number Estimate from Tumor/normal Sequencing using unmatched normal sample(s) for log ra…
  ☆12Updated 2 years ago
• csoneson / treeclimbR
  ☆20Updated last month