Send R code/R scripts/shell commands to LSF cluster without leaving R
☆27Mar 14, 2025Updated last year
Alternatives and similar repositories for bsub
Users that are interested in bsub are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Apr 20, 2025Updated last year
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆14Mar 16, 2026Updated 4 months ago
- Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…☆20Oct 27, 2021Updated 4 years ago
- Repository for signature genes from Immune Cell Atlas☆20Sep 25, 2019Updated 6 years ago
- ☆11Mar 16, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- scRNA-seq data visualization from scrattch☆30Aug 20, 2025Updated 11 months ago
- BioCarta pathway images☆11Jan 30, 2026Updated 5 months ago
- mutSignatures R package - updated (dev) version - 2.1.4☆14Jan 18, 2023Updated 3 years ago
- Provides classes for working with sets☆11Dec 19, 2025Updated 7 months ago
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 7 months ago
- SEEKIN: SEquence-based Estimation of KINship☆15Oct 11, 2017Updated 8 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- que paquete☆10Jul 17, 2024Updated 2 years ago
- ☆37Jun 26, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Tools to gather evidence for structural variation via breakpoint detection.☆21Mar 27, 2026Updated 4 months ago
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆372Jul 6, 2026Updated 3 weeks ago
- R interface to megadepth: BigWig and BAM related utilities☆14Mar 31, 2026Updated 3 months ago
- Pan gGnome Viewer☆10Jul 10, 2025Updated last year
- Pipeline for generating RNAseq-based cancer patient reports☆15Jul 12, 2026Updated 2 weeks ago
- Model-based tumour subclonal deconvolution using population genetics☆36Dec 2, 2025Updated 7 months ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests☆14May 27, 2025Updated last year
- Run a command and report its process tree's CPU, memory, and I/O usage☆21Jul 21, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Fuji plot—a circos representation of multiple GWAS results—☆99May 29, 2025Updated last year
- Terraform template to create AWS resources to execute jobs using nextflow☆22Mar 1, 2023Updated 3 years ago
- Pipeline to produce consensus reads using unique molecular indexes/barcodes (UMIs)☆29Updated this week
- ☆13Jun 15, 2022Updated 4 years ago
- 3D GWAS across multiple phenotypes☆13Oct 11, 2022Updated 3 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆26Jul 17, 2026Updated last week
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 8 months ago
- R package for detecting differential distributions using a statistical test based on the wasserstein distance☆28Nov 7, 2025Updated 8 months ago
- cEll tyPe enrIChment☆17Dec 11, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- VarGen is an R package designed to get a list of variants related to a disease. It just need an OMIM morbid ID as input and optionally a…☆18Jan 28, 2024Updated 2 years ago
- Documentations and Tutorials of Gosling.js☆12Sep 13, 2021Updated 4 years ago
- Compares pangenome graphs by calculating the segmentation distance between two GFA (Graphical Fragment Assembly) files.☆14Apr 28, 2026Updated 3 months ago
- An R for fast and flexible DNA methylation analysis☆36Jul 21, 2026Updated last week
- An R package for performing STAAR procedure in whole-genome sequencing studies☆103Jul 14, 2026Updated 2 weeks ago
- ☆14Dec 2, 2022Updated 3 years ago
- A long-read analysis toolbox for cancer and population genomics☆23Jul 1, 2025Updated last year