goncalves-lab / waddRLinks
R package for detecting differential distributions using a statistical test based on the wasserstein distance
☆27Updated last month
Alternatives and similar repositories for waddR
Users that are interested in waddR are comparing it to the libraries listed below
Sorting:
- R package for benchmarking single cell analysis methods☆32Updated 2 years ago
- Visualising single-cell trajectories, including comparisons between two models 📈☆31Updated 4 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- Gene-level general linear mixed model☆23Updated 2 months ago
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Human brain, >200,000 nuclei☆24Updated 4 years ago
- Single Cell multimodal data scripts for downloading datasets☆17Updated 3 weeks ago
- GEO RNA-seq Experiments Processing Pipeline☆22Updated 6 years ago
- A General Framework for Consensus Partitioning☆63Updated 10 months ago
- Brings SingleCellExperiment objects to the tidyverse☆36Updated last month
- Convert your single-cell/spatial analyses to parallel HPC/cloud workflows just using pipes in R☆15Updated 11 months ago
- Probabilistic gene expression barcodes for cell type annotation☆25Updated 3 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).☆21Updated last year
- An r package that works as a wrapper to homologene☆47Updated 2 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- distinct: a method for differential analyses via hierarchical permutation tests☆11Updated 2 years ago
- Identify and correct invalid gene symbols☆60Updated last year
- Collection of useful methods for single cell analysis☆14Updated last year
- Toolbox package for organizing and working with TCGA data☆28Updated 3 weeks ago
- Single-cell analysis with non-negative matrix factorization☆45Updated 4 months ago
- Cell type deconvolution from high-throughput gene expression profiling experiments.☆31Updated 4 years ago
- eVITTA: an easy Visualization and Inference Toolbox for Transcriptome Analysis☆12Updated last year
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Updated 2 years ago
- Dimensionality reduction and batch integration methods for single cell data☆16Updated 2 years ago
- Integrating zingeR with ZINB-WaVE weights☆24Updated 7 years ago
- Differential Correlation across Ranked Samples☆12Updated 2 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- Course Materials for Genomics Data Mining☆22Updated 2 months ago
- Cancer Dependency Map package☆30Updated last year