goncalves-lab / waddRView external linksLinks
R package for detecting differential distributions using a statistical test based on the wasserstein distance
☆27Nov 7, 2025Updated 3 months ago
Alternatives and similar repositories for waddR
Users that are interested in waddR are comparing it to the libraries listed below
Sorting:
- simpler single cell RNAseq data Visualization☆10Feb 28, 2025Updated 11 months ago
- Repository for signature genes from Immune Cell Atlas☆18Sep 25, 2019Updated 6 years ago
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- ☆12Apr 16, 2021Updated 4 years ago
- Hierarchical Random Forest for Information Transfer☆13May 26, 2021Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆25Apr 26, 2022Updated 3 years ago
- ☆16Feb 17, 2025Updated 11 months ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Jan 4, 2018Updated 8 years ago
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Jun 30, 2023Updated 2 years ago
- ☆15Dec 9, 2019Updated 6 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Jun 28, 2025Updated 7 months ago
- Repository for the Anczukow-Lab splicing pipeline☆17Mar 17, 2025Updated 10 months ago
- ☆10May 31, 2022Updated 3 years ago
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆21Sep 1, 2021Updated 4 years ago
- INTEND (IntegratioN of Transcriptomic and EpigeNomic Data), a novel algorithm for integrating gene expression and DNA methylation dataset…☆12Dec 12, 2022Updated 3 years ago
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆38Updated this week
- Clone identification from single-cell data☆61Nov 10, 2022Updated 3 years ago
- Integrated workflow for SV calling from single-cell Strand-seq data☆25Updated this week
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Mar 21, 2021Updated 4 years ago
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 4 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- ☆10Mar 11, 2025Updated 11 months ago
- Single-cell Scalable Visualization and Analytics☆27Mar 26, 2019Updated 6 years ago
- ☆47Apr 18, 2020Updated 5 years ago
- ☆26Oct 15, 2020Updated 5 years ago
- ☆31Apr 9, 2022Updated 3 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- R interface to megadepth: BigWig and BAM related utilities☆12Dec 12, 2024Updated last year
- ☆14Feb 4, 2026Updated last week
- ☆48Jan 7, 2025Updated last year
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Apr 30, 2024Updated last year
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 2 years ago
- Code and analysis pipeline for NASC-seq.☆11Jun 14, 2022Updated 3 years ago
- Provides classes for working with sets☆11Dec 19, 2025Updated last month
- BPNet manuscript code.☆12Dec 1, 2020Updated 5 years ago
- Breast Cancer Single Cell Atlas☆12Mar 31, 2022Updated 3 years ago
- deconvolution for RNAseq and bisulfite sequencing☆11Aug 17, 2020Updated 5 years ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 9 years ago