R package for detecting differential distributions using a statistical test based on the wasserstein distance
☆27Nov 7, 2025Updated 4 months ago
Alternatives and similar repositories for waddR
Users that are interested in waddR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- simpler single cell RNAseq data Visualization☆10Feb 28, 2025Updated last year
- LaTeX template of graduate Thesis [University of Chinese Academy of Sciences]☆12Nov 7, 2017Updated 8 years ago
- Repository for signature genes from Immune Cell Atlas☆19Sep 25, 2019Updated 6 years ago
- ☆12Apr 16, 2021Updated 4 years ago
- Probabilistic gene expression barcodes for cell type annotation☆26Apr 26, 2022Updated 3 years ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆16Jun 28, 2025Updated 8 months ago
- Hierarchical Random Forest for Information Transfer☆13May 26, 2021Updated 4 years ago
- ☆15Dec 9, 2019Updated 6 years ago
- Non-negative Independent Factor Analysis for single cell RNA-seq☆11Feb 25, 2022Updated 4 years ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Jan 4, 2018Updated 8 years ago
- Single-cell Scalable Visualization and Analytics☆27Mar 26, 2019Updated 7 years ago
- Efficiently compute robust markers across single-cell datasets☆12Apr 21, 2021Updated 4 years ago
- SClineager: a Bayesian hierarchical model that performs lineage tracing of single cells based on genetic markers☆10Apr 30, 2024Updated last year
- Provides classes for working with sets☆11Dec 19, 2025Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆16Feb 17, 2025Updated last year
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 2 years ago
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆21Sep 1, 2021Updated 4 years ago
- ☆47Apr 18, 2020Updated 5 years ago
- R package for benchmarking single cell analysis methods☆32Oct 4, 2023Updated 2 years ago
- Flexible Integration of single-cell RNA-sequencing data for large-scale Multi-tissue cell atlas datasets☆13Sep 20, 2022Updated 3 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- Multi-study integration of cellular trajectories☆19Jun 1, 2020Updated 5 years ago
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Jun 30, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Advanced steps of the OSCA book☆14Nov 19, 2025Updated 4 months ago
- Clone identification from single-cell data☆63Nov 10, 2022Updated 3 years ago
- A collection of 50+ trajectory inference methods within a common interface 📥📤☆133Dec 21, 2023Updated 2 years ago
- Shiny App for comparison of samples and plotting effect size☆29Apr 9, 2024Updated last year
- It discovers linear dependent columns and then replaces linear dependent columns with linearly independent columns that span the space o…☆16Jul 4, 2024Updated last year
- TIDE (Tumor Immune Dysfunction and Exclusion), a gene expression biomarker to predict the clinical response to immune checkpoint blockade…☆41Mar 13, 2026Updated 2 weeks ago
- Scissor package☆254May 10, 2024Updated last year
- A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.☆95Jul 23, 2024Updated last year
- scRNA-seq clustering, visualization, and differential expression pipeline from Sims Lab papers☆22Sep 28, 2021Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆20Jan 16, 2026Updated 2 months ago
- The code and analyses accompanying the manuscript “MetaMap: An atlas of metatranscriptomic reads in human disease-related RNA-seq data”.☆12Nov 28, 2018Updated 7 years ago
- Send R code/R scripts/shell commands to LSF cluster without leaving R☆26Mar 14, 2025Updated last year
- Repository for the Anczukow-Lab splicing pipeline☆17Mar 17, 2025Updated last year
- RNA-velocity informed embeddings for visualizing cellular trajectories☆45Sep 5, 2022Updated 3 years ago
- Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.☆52Jan 20, 2025Updated last year
- ParamHelpers Next Generation☆28Mar 4, 2026Updated 3 weeks ago