mkanai / fujiplotLinks
Fuji plot—a circos representation of multiple GWAS results—
☆92Updated 7 months ago
Alternatives and similar repositories for fujiplot
Users that are interested in fujiplot are comparing it to the libraries listed below
Sorting:
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆61Updated 5 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆55Updated 2 months ago
- Enhanced version of the FastQTL QTL mapper☆71Updated 2 years ago
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆37Updated 4 years ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆95Updated last month
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆90Updated 2 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆74Updated 2 months ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆57Updated 3 months ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆71Updated last month
- Sequence kernel association test (SKAT)☆54Updated 5 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 7 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆77Updated 3 months ago
- An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline☆69Updated 9 months ago
- Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper☆44Updated last year
- An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.☆72Updated last year
- Detecting intron retention from RNA-Seq experiments☆55Updated last year
- HMMRATAC peak caller for ATAC-seq data☆98Updated last year
- A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.☆36Updated 3 years ago
- Short Time-series Expression Miner (STEM) and Dynamic Regulatory Events Miner (DREM)☆21Updated 5 years ago
- A pipeline for differential expression and differential alternative splicing analysis☆66Updated last year
- ☆39Updated 4 years ago
- R package containing useful functions for mutational signature analysis☆87Updated last week
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆53Updated 6 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆32Updated 3 years ago
- R package for genomic feature analysis and visualization☆79Updated 9 months ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated 2 years ago
- R package for bcbio RNA-seq analysis.☆63Updated last year
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆47Updated last week