mkanai / fujiplot
Fuji plot—a circos representation of multiple GWAS results—
☆84Updated last year
Alternatives and similar repositories for fujiplot:
Users that are interested in fujiplot are comparing it to the libraries listed below
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆47Updated 3 weeks ago
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆44Updated last week
- A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.☆35Updated 3 years ago
- OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data☆52Updated 3 weeks ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆67Updated last month
- Scripts for GWAS association and metaanalysis☆43Updated 4 years ago
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆30Updated last year
- Burden testing against public controls☆50Updated last year
- A wrapper for liftOver for converting plink genotype data between different genome reference builds☆51Updated 6 years ago
- R package designed to simplify structural variant analysis☆72Updated 3 years ago
- Enhanced version of the FastQTL QTL mapper☆65Updated 2 years ago
- This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…☆59Updated 4 years ago
- BigWig and BAM utilities☆96Updated last year
- Quality of RNA-Seq Toolset☆53Updated 6 years ago
- An R package for import, QC and analysis of Illumina Infinium genotyping arrays☆34Updated 7 years ago
- Software for predicting library complexity and genome coverage in high-throughput sequencing.☆82Updated 6 months ago
- Sequence kernel association test (SKAT)☆49Updated 2 months ago
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆80Updated 5 months ago
- mity: A highly sensitive mitochondrial variant analysis pipeline for whole genome sequencing data☆36Updated last month
- An open-source and scalable solution to NGS analysis powered by the NIH's Biowulf cluster.☆4Updated last year
- An R package to Identify, Annoatate and Visialize Isoform Switches with Functional Consequences (from RNA-seq data)☆112Updated 3 months ago
- An R interface to the MEME Suite☆50Updated 7 months ago
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- reproduce the functional enrichment analysis presented in GTEx paper using clusterProfiler/DOSE☆33Updated 3 years ago
- Create regional association plots from GWAS or meta-analysis☆61Updated 5 years ago
- ☆42Updated 7 months ago
- Report reverse and ambiguous strand SNPs in GWAS data☆33Updated 5 years ago
- Fast, integrative fine mapping with functional data☆58Updated 5 years ago
- gemBS is a bioinformatics pipeline designed for high throughput analysis of DNA methylation from Whole Genome Bisulfite Sequencing data (…☆33Updated 3 years ago
- Matrix eQTL: Ultra fast eQTL analysis via large matrix operations☆79Updated last year