Alternatives and similar repositories for fujiplot

Users that are interested in fujiplot are comparing it to the libraries listed below

• eQTL-Catalogue / qtlmap
  Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue
  ☆51Updated this week
• francois-a / fastqtl
  Enhanced version of the FastQTL QTL mapper
  ☆68Updated 2 years ago
• jianhong / trackViewer
  A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot
  ☆73Updated 2 months ago
• StatFunGen / xqtl-protocol
  Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium
  ☆47Updated last week
• kundajelab / phantompeakqualtools
  This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to…
  ☆60Updated 5 years ago
• jokergoo / rGREAT
  GREAT Analysis - Functional Enrichment on Genomic Regions
  ☆90Updated 6 months ago
• immunogenomics / HLA-TAPAS
  HLA-TAPAS pipeline for HLA association and fine-mapping studies
  ☆54Updated last year
• ivanek / Gviz
  This is the Gviz development repository. Gviz plots data and annotation information along genomic coordinates.
  ☆86Updated 7 months ago
• gagneurlab / OUTRIDER
  OUTRIDER: OUTlier in RNA-seq fInDER is an R-based framework to find aberrantly expressed genes in RNA-seq data
  ☆54Updated last month
• Nik-Zainal-Group / signature.tools.lib
  R package containing useful functions for mutational signature analysis
  ☆84Updated this week
• andreyshabalin / MatrixEQTL
  Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
  ☆85Updated last year
• parklab / ShatterSeek
  ☆72Updated 2 years ago
• statgen / locuszoom-standalone
  Create regional association plots from GWAS or meta-analysis
  ☆61Updated 5 years ago
• brentp / combined-pvalues
  combining p-values using modified stouffer-liptak for spatially correlated results (probes)
  ☆46Updated 3 years ago
• hellbelly / BS-Snper
  ☆38Updated 4 years ago
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆66Updated last year
• gkichaev / PAINTOR_V3.0
  Fast, integrative fine mapping with functional data
  ☆60Updated 6 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆52Updated 3 months ago
• robinweide / GENOVA
  GENome Organisation Visual Analytics
  ☆80Updated 8 months ago
• williamritchie / IRFinder
  Detecting intron retention from RNA-Seq experiments
  ☆55Updated last year
• ben-laufer / DMRichR
  A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methyl…
  ☆46Updated last year
• leelabsg / SKAT
  Sequence kernel association test (SKAT)
  ☆52Updated last month
• biocore-ntnu / snpflip
  Report reverse and ambiguous strand SNPs in GWAS data
  ☆33Updated 6 years ago
• vivekbhr / Subread_to_DEXSeq
  Scripts to import your FeatureCounts output into DEXSeq
  ☆34Updated 6 years ago
• hms-dbmi / spp
  SPP - R package for analysis of ChIP-seq and other functional sequencing data
  ☆43Updated 4 years ago
• LiuLabUB / HMMRATAC
  HMMRATAC peak caller for ATAC-seq data
  ☆99Updated 10 months ago
• jlab-code / MethylStar
  A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.
  ☆35Updated 3 years ago
• genepi / nf-gwas
  A nextflow pipeline to perform state-of-the-art genome-wide association studies.
  ☆74Updated 5 months ago
• sirselim / illumina450k_filtering
  A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays
  ☆30Updated last year
• YeoLab / outrigger
  Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data
  ☆67Updated 5 years ago