Alternatives and similar repositories for BioCartaImage

Users that are interested in BioCartaImage are comparing it to the libraries listed below

• myles-lewis / glmmSeq
  Gene-level general linear mixed model
  ☆22Updated 7 months ago
• paulgeeleher / pRRophetic
  R package
  ☆22Updated last year
• stephenturner / msigdf
  Molecular Signatures Database (MSigDB) in a data frame
  ☆16Updated 6 years ago
• hancockinformatics / pathlinkR
  Analysis and visualization of RNA-Seq results
  ☆30Updated 3 months ago
• ShixiangWang / gcap
  GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…
  ☆20Updated last week
• crazyhottommy / single-cell-DNAseq-notes
  ☆16Updated 2 years ago
• AlexandrovLab / SigProfilerMatrixGeneratorR
  R wrapper for utilizing the SigProfilerMatrixGenerator framework
  ☆20Updated 2 years ago
• leekgroup / networks_correction
  Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"
  ☆16Updated 6 years ago
• liuhong-jia / scAnno
  ☆25Updated 2 months ago
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆19Updated 3 years ago
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 5 years ago
• gaospecial / ccgraph
  ☆11Updated 5 years ago
• PoisonAlien / somaticfreq
  knowledge-based genotyping of cancer hotspots from the tumor BAM files
  ☆21Updated 3 years ago
• Sarah145 / CCPlotR
  An R package for visualising cell-cell interactions
  ☆44Updated last year
• qingjian1991 / MPTevol
  ☆10Updated 2 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆28Updated last year
• cboix / epimap_vis
  Code for EpiMap data browser
  ☆14Updated last year
• XSLiuLab / tumor-immunogenicity-score
  TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
  ☆32Updated 3 years ago
• bernatgel / regioneR
  An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
  ☆13Updated 3 months ago
• jgamache014 / snRNA-seq-workflow
  Human brain, >200,000 nuclei
  ☆24Updated 4 years ago
• KatrionaGoldmann / volcano3D
  An R package to plot interactive three-way differential expression analysis
  ☆38Updated 2 years ago
• daisybio / SPONGE
  Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference
  ☆12Updated last year
• LieberInstitute / megadepth
  R interface to megadepth: BigWig and BAM related utilities
  ☆12Updated 8 months ago
• guokai8 / VennDetail
  VennDetail: a bioconductor package for VennDiagram visualization and details extraction
  ☆29Updated 4 months ago
• uc-bd2k / GREP2
  GEO RNA-seq Experiments Processing Pipeline
  ☆21Updated 5 years ago
• lianos / multiGSEA
  NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …
  ☆21Updated 4 years ago
• immunogenomics / cdr3-QTL
  Trans-association between HLA and TCR-CDR3
  ☆18Updated 2 years ago
• moosa-r / rbioapi
  rbioapi: User-Friendly R Interface to Biologic Web Services' API
  ☆22Updated last month
• Asa12138 / pcutils
  Useful Utilities for Statistics and Visualization.
  ☆28Updated 2 months ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago