a Contig Alignment Tool for Pairwise Assembly Comparison
☆12Dec 11, 2019Updated 6 years ago
Alternatives and similar repositories for Catpac
Users that are interested in Catpac are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis pipeline for functional metagenomic sequencing data obtained using nanopore sequencing☆12Nov 20, 2016Updated 9 years ago
- GC Skew Test for Bacterial Genomes☆32Sep 29, 2022Updated 3 years ago
- Nanopore desc☆18Aug 22, 2016Updated 9 years ago
- ☆26Oct 31, 2019Updated 6 years ago
- ☆23Jun 29, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- reference-based long read assemblies of bacterial genomes☆52Aug 9, 2021Updated 4 years ago
- Graph-based mapping of long sequences, noisy or HiFi.☆55Oct 5, 2020Updated 5 years ago
- ☆29Sep 28, 2021Updated 4 years ago
- ☆11Feb 21, 2020Updated 6 years ago
- Interactive, web tool for exploring pan-genome of bacterial strains☆50Jan 14, 2026Updated 5 months ago
- Analysis tool for Nanopore sequencing data☆11Apr 26, 2024Updated 2 years ago
- Exact Tandem Repeat Finder (not a TRF replacement)☆51Oct 22, 2019Updated 6 years ago
- Apollo is an assembly polishing algorithm that attempts to correct the errors in an assembly. It can take multiple set of reads in a sing…☆28May 10, 2020Updated 6 years ago
- Subset of fast5 files contained in a fastq, BAM, or SAM file.☆11Mar 29, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Validate and edit small eukaryotic genome assemblies☆32Apr 28, 2023Updated 3 years ago
- Find common blocks and differences between DNA sequences☆45Nov 5, 2025Updated 7 months ago
- R scripts and tutorial datasets to detect conditionally rare taxa in time series of microbial communities