gwct / refereeLinks
Reference genome quality scores
☆20Updated 5 years ago
Alternatives and similar repositories for referee
Users that are interested in referee are comparing it to the libraries listed below
Sorting:
- Scaffolding with assembly likelihood optimization☆21Updated 5 years ago
- Haplotype-aware genome assembly toolkit☆30Updated 6 years ago
- Find Unique genomic Regions☆32Updated last week
- Improved Phased Assembler☆28Updated 3 years ago
- WGS (Wheat) Robust Assembly Pipeline☆22Updated 4 years ago
- Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.☆35Updated 9 months ago
- PoSeiDon: positive selection detection and recombination analysis pipeline☆39Updated 4 months ago
- Assembler for raw de novo genome assembly of long uncorrected reads.☆35Updated 6 years ago
- OrthoFiller: Identifying missing annotations for evolutionarily conserved genes.☆22Updated 3 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆25Updated 5 years ago
- Annotated Genome Optimization Using Transcriptome Information☆20Updated 5 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆36Updated last month
- Implementation of ToL genome assembly workflows☆26Updated this week
- ☆28Updated 3 years ago
- transposable element typing pipeline☆19Updated last year
- Genome assembly soft-masking using Red (REpeat Detector)☆18Updated 7 years ago
- Economic Genome Assembly from Low Coverage Illumina and Nanopore Data☆19Updated 3 years ago
- This is a library C/Python/CLI for working with TAF (.taf,.taf.gz) and MAF (.maf) alignment files☆29Updated 5 months ago
- A comparative genome scaffolding tool☆16Updated 7 years ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆26Updated last year
- Validate and edit small eukaryotic genome assemblies☆32Updated 2 years ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆29Updated last year
- Transfer coordinates across genomes☆23Updated 8 months ago
- extract MSAs from genome variation graphs☆34Updated 5 years ago
- Differential k-mer analysis☆39Updated 2 years ago
- Fast and accurate tool for estimating genomic distances between genome-skims☆47Updated 2 years ago
- Panache is a web-based interface designed for the visualization of linearized pangenomes. It can be used to show presence/absence informa…☆46Updated 2 years ago
- Just Annotate My Genome☆19Updated last year
- PREQUAL: a pre-alignment quality filter for comparative sequence analyses☆33Updated 3 years ago
- ♥ Fast and Accurate Estimation of Evolutionary Distances☆29Updated 9 months ago