R package to detect splicing QTLs (sQTLs)
☆15Feb 28, 2021Updated 5 years ago
Alternatives and similar repositories for sQTLseekeR
Users that are interested in sQTLseekeR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Framework for efficient high-dimensional association analyses.☆19Oct 18, 2026Updated 2 weeks ago
- Paired Replicate Analysis of Allelic Differential Splicing Events☆14Feb 21, 2023Updated 3 years ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆30May 19, 2017Updated 9 years ago
- CircSplice☆11Feb 27, 2019Updated 7 years ago
- Tissue-specific variant effect predictions on splicing☆44May 23, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- http://tinyurl.com/cruk-shiny☆10Sep 13, 2017Updated 9 years ago
- Exon-exon splice junctions across SRA☆43Jul 30, 2021Updated 5 years ago
- MUltiScale enrIchment Calling for ChIP-Seq Datasets☆23Mar 14, 2019Updated 7 years ago
- A set of real-world RepSeq datasets used for testing the VDJtools software☆10Jul 8, 2016Updated 10 years ago
- Annotation-independent molecular-evidence archives for single-cell RNA-seq☆19Oct 8, 2026Updated 3 weeks ago
- ☆16Jun 12, 2020Updated 6 years ago
- SCALLOP-INF analysis☆21Jul 7, 2026Updated 3 months ago
- ☆13Jun 2, 2020Updated 6 years ago
- An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations☆17Mar 27, 2018Updated 8 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Rep-Seq data analysis tutorial☆12Dec 6, 2017Updated 8 years ago
- ☆11May 16, 2020Updated 6 years ago
- GTEx analysis scripts☆20Mar 14, 2017Updated 9 years ago
- Genome-wide association studies tutorial 🧬☆54Dec 2, 2019Updated 6 years ago
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆184Mar 11, 2026Updated 7 months ago
- An R package to create forestplots of measures of effects with their confidence intervals.☆66May 7, 2021Updated 5 years ago
- GENIE3 (GEne Network Inference with Ensemble of trees) R-package☆38Apr 5, 2022Updated 4 years ago
- ☆14Dec 10, 2025Updated 10 months ago
- Tools for doing x way meta-analysis☆12Apr 12, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆14Aug 31, 2016Updated 10 years ago
- Code and figures accompanying the paper, "Single-cell alternative splicing analysis with Expedition reveals splicing dynamics during neu…☆20Jun 28, 2017Updated 9 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Jan 18, 2021Updated 5 years ago
- A Nextflow pipeline to play Doom☆10Dec 1, 2025Updated 11 months ago
- A repo contains historical and updated MTEC libraries.☆19Aug 28, 2026Updated 2 months ago
- Description of VCF to aGDS conversion and annotation on the UK Biobank RAP☆14Sep 29, 2025Updated last year
- A curated list (with links) of useful tools for genome-wide association analysis.☆11Mar 1, 2019Updated 7 years ago
- A rapido and lightweight method for PGS computation☆14Aug 20, 2026Updated 2 months ago
- ☆25Apr 15, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CapR calculates probabilities that each RNA base position is located within each secondary structural context for long RNA sequences.☆10Oct 10, 2020Updated 6 years ago
- RNA-binding protein motif analysis☆11Sep 29, 2025Updated last year
- apa: research platform for the study of alternative polyadenylation, expressRNA.org☆12Sep 2, 2021Updated 5 years ago
- Hail batch pipeline and scripts for local ancestry inference☆10Oct 6, 2025Updated last year
- From QC to summary statistics☆17Jun 27, 2020Updated 6 years ago
- Copy number vaiation detection from SNP arrays☆97May 19, 2024Updated 2 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆34Aug 7, 2026Updated 2 months ago