Framework for efficient high-dimensional association analyses.
☆19Feb 11, 2026Updated 6 months ago
Alternatives and similar repositories for hase
Users that are interested in hase are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R package to detect splicing QTLs (sQTLs)☆15Feb 28, 2021Updated 5 years ago
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 4 years ago
- Calculates allelic Fold Change (aFC) using standard input files for fastQTL.☆27Jun 30, 2022Updated 4 years ago
- Published at Bioinformatics☆12Jul 4, 2024Updated 2 years ago
- Quick preview of HDF5 files on the command line☆13Oct 5, 2018Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- locus R package - Large-scale variational inference for variable selection in sparse multiple-response regression☆10Jan 2, 2024Updated 2 years ago
- ☆12Apr 14, 2021Updated 5 years ago
- A Docker workflow to work reproducibly with papaja in RStudio☆10Nov 16, 2021Updated 4 years ago
- Committee Meeting Reports - LaTeX☆11Jun 11, 2018Updated 8 years ago
- Identifying transcription factor binding sites from neural network contribution scores☆25Updated this week
- Code for performing PCA followed by CCA☆19Dec 2, 2018Updated 7 years ago
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆84Oct 7, 2025Updated 10 months ago
- A workflow for construction of Gene Expression count Matrices (GEMs). Useful for Differential Gene Expression (DGE) analysis and Gene Co-…☆37Nov 25, 2024Updated last year
- Package to detect eQTLs jointly in multiple subgroups (e.g. tissues) via Bayesian Model Averaging.☆24Apr 16, 2018Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Open Targets python framework for post-GWAS analysis☆58Updated this week
- PredictDB Pipeline for GTEx v7 data☆18Nov 9, 2022Updated 3 years ago
- Visualization methods for omics dataset quality control☆10Jun 24, 2026Updated 2 months ago
- A web app to search pubmed☆12Jul 8, 2024Updated 2 years ago
- A fast and lightweight python-based linear mixed-model solver for use in genome-wide association studies.☆44Dec 14, 2015Updated 10 years ago
- R is said to get way faster if you change the BLAS library it is linked to. Is it true?☆11Mar 11, 2021Updated 5 years ago
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆18Nov 25, 2024Updated last year
- tools to efficiently retrieve and calculate LD☆35Sep 3, 2021Updated 4 years ago
- SCASA: Single cell transcript quantification tool☆23Nov 24, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆184Mar 11, 2026Updated 5 months ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆38Updated this week
- S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects☆12Apr 29, 2026Updated 4 months ago
- Digital verifiable lab test results.☆15Feb 4, 2021Updated 5 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆13Jun 11, 2019Updated 7 years ago
- ☆13Feb 16, 2019Updated 7 years ago
- Explore, compare, and evaluate Bioconductor packages related to genomic copy number analysis☆21Mar 15, 2023Updated 3 years ago
- Rendering local ipynb to static HTML☆15Jan 27, 2015Updated 11 years ago
- A comprehensive platform for population-scale genomic analyses☆10Apr 20, 2026Updated 4 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆10Aug 28, 2025Updated last year
- HPC Python Workshop at RSECon22☆14Oct 17, 2022Updated 3 years ago
- Python client for GA4GH htsget protocol☆15Nov 7, 2022Updated 3 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆34Aug 7, 2026Updated 3 weeks ago
- Continuous Integration and Continuous developement for scientific applications☆11May 19, 2020Updated 6 years ago
- MpcLib - A Multi-Party Computation Library☆16Jun 5, 2016Updated 10 years ago
- Code for building and testing variant ranking strategies☆18Apr 13, 2026Updated 4 months ago