Hypercubed / connectome
Web tool for exploring cell-cell ligand-receptor mediated communication networks
☆24Updated 8 years ago
Alternatives and similar repositories for connectome
Users that are interested in connectome are comparing it to the libraries listed below
Sorting:
- ARCHS4 RNA-seq processing scripts and web server pages.☆57Updated 4 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆28Updated last year
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆22Updated 6 years ago
- R/Bioconductor package for working with 10x scATACseq data☆40Updated last year
- Shiny app for the analysis of single cell data☆26Updated 2 months ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated last year
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆29Updated 6 years ago
- ☆27Updated 6 months ago
- A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasets☆18Updated 4 years ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆28Updated last month
- processes GoT amplicon data and generates a table of metrics☆29Updated 2 years ago
- A python tool to do comparative analysis of mulitple single cell datasets.☆22Updated 5 years ago
- Pathway-based trajectory inference method for time-series scRNAseq data☆25Updated 3 years ago
- ☆23Updated 5 years ago
- Explore the cancer relevance of your gene list☆51Updated 2 months ago
- Hierarchical HotNet is an algorithm for finding hierarchies of active subnetworks.☆37Updated 5 years ago
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆42Updated 8 months ago
- Signac☆25Updated 2 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- Single-cell Scalable Visualization and Analytics☆25Updated 6 years ago
- Discover differential transcript usage from polyA-captured single cell RNA-seq data☆50Updated last year
- epigenome analysis to rank transcription factors☆30Updated 2 years ago
- Fast motif matching in R☆47Updated last year
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- Single cell interactive plotting tools☆23Updated 4 years ago
- Preprocessing of single-cell RNA-Seq (deprecated)☆62Updated 5 years ago
- Figure depicting the breadth of multimodal scRNA-seq technologies☆16Updated 6 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Analysing Capture Seq Count Data☆14Updated 6 years ago