Hypercubed / connectomeLinks
Web tool for exploring cell-cell ligand-receptor mediated communication networks
☆23Updated 8 years ago
Alternatives and similar repositories for connectome
Users that are interested in connectome are comparing it to the libraries listed below
Sorting:
- ARCHS4 RNA-seq processing scripts and web server pages.☆58Updated 4 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago
- Bulk-Sequence Single-Cell Gene Expression Deconvolution Pipeline☆45Updated 2 years ago
- BingleSeq - A user-friendly R package for Bulk and Single-cell RNA-Seq data analyses☆22Updated 4 years ago
- Harvard FAS informatics scRNAseq workshop website☆38Updated 6 years ago
- Signac☆25Updated 2 years ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- An R-based interface for loom files☆66Updated 5 years ago
- ☆43Updated last year
- An R Package for Geneset Enrichment Workflows☆76Updated 2 months ago
- Explore the cancer relevance of your gene list☆51Updated 5 months ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- This repostory contains codes for Shimada et al., "A tool for browsing the Cancer Dependency Map reveals functional connections between g…☆13Updated 3 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆18Updated 4 years ago
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 6 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆20Updated 5 years ago
- ☆15Updated 4 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- ☆24Updated 2 months ago
- Documents used for workshops on single cell analysis☆27Updated 8 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆30Updated 6 years ago
- A General Framework for Consensus Partitioning☆63Updated 6 months ago
- R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis☆27Updated 8 months ago
- Reproducible pipeline for "Comprehensive evaluation of cell-type quantification methods for immuno-oncology", Sturm et al. 2019, https://…☆43Updated 5 years ago
- ☆44Updated 9 months ago
- Human transcription factor target genes from 6 databases in convenient R format.☆86Updated 6 years ago
- ☆20Updated 8 years ago
- Course Materials for Genomics Data Mining☆22Updated 2 months ago
- consistent quantification of external RNA-seq data sets☆58Updated last year
- Cancer Dependency Map package☆30Updated 11 months ago