GeneFeng / CircSpliceLinks
CircSplice
☆12Updated 6 years ago
Alternatives and similar repositories for CircSplice
Users that are interested in CircSplice are comparing it to the libraries listed below
Sorting:
- Scripts and notebooks used in Akgol Oksuz et al. paper☆11Updated 5 years ago
- Long read to rMATS☆32Updated 2 years ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAs☆10Updated 6 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 2 months ago
- ☆17Updated last year
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 6 years ago
- Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers☆15Updated 7 years ago
- ☆27Updated 2 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆23Updated 6 years ago
- Analysis pipeline for our circSC manuscript☆14Updated 3 years ago
- ☆11Updated 2 years ago
- Workflow for Sequenza, cellularity and ploidy☆25Updated 5 months ago
- ☆20Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 6 years ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Updated 5 years ago
- GENome Organisation Visual Analytics☆15Updated 4 years ago
- General Use Scripts and Helper functions☆16Updated 7 years ago
- ☆23Updated 4 years ago
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆19Updated 2 years ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆15Updated 6 years ago
- ☆11Updated 7 years ago
- miRge - microRNA alignment software for small RNA-seq data, now at v2.0☆28Updated 3 years ago
- software for analysis of chromatin feature occupancy profiles from high-throughput sequencing data☆17Updated 6 years ago
- A pipeline for Smooth-seq data analysis.☆10Updated 4 years ago
- Main repository for Drews et al. (Nature, 2022)☆42Updated 2 years ago
- Algorithm for detecting alternative splicing in a population of single cells. See details in Welch et al., Nucleic Acids Research 2016: h…☆23Updated 9 years ago
- All-FIT - Allele-Frequency-based Imputation of Tumor Purity☆18Updated 6 years ago
- Single Cell Caller (SCcaller) - Identify single nucleotide variations (SNVs) from single cell sequencing data☆35Updated last year
- ☆19Updated 7 years ago
- ☆13Updated 3 years ago