Gregor-Mendel-Institute / mlmmLinks
An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations
☆17Updated 7 years ago
Alternatives and similar repositories for mlmm
Users that are interested in mlmm are comparing it to the libraries listed below
Sorting:
- Glimma R package☆50Updated last year
- Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/☆104Updated 4 years ago
- Grid and ggplot2 based visualization for biological data☆115Updated 2 months ago
- QTL analysis software for high-dimensional data and complex cross designs☆37Updated 6 months ago
- ☆30Updated 4 years ago
- Genomic plot in trellis layout☆42Updated last year
- Effective Computing—Resources for Computational Biologists☆27Updated 5 years ago
- Vennerable provides Venn diagrams in R. It displays Venn and Euler diagrams for up to 9 different sets and using a variety of geometries.…☆91Updated 4 years ago
- An htmlwidget version of igv, for RStudio and Shiny apps☆38Updated 3 months ago
- An R Bioconductor package providing interactive connections to igv.js (the Integrative Genomics Viewer) in a web browser☆46Updated 2 weeks ago
- fastqcr: Quality Control of Sequencing Data☆76Updated 2 years ago
- Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches☆45Updated last year
- An efficient multi-locus mixed-model approach for genome-wide association studies in structured populations☆14Updated 7 years ago
- A small R package to make sequencing read coverage plots in R.☆40Updated last month
- Devel repository for minfi☆64Updated last year
- Genome Interval Arithmetic in R☆94Updated 2 weeks ago
- Bioconductor package for management of multi-assay data☆74Updated last month
- Read HOMER motif analysis output in R.☆17Updated 7 years ago
- The official repository of the Bioconductor 2019 Conference Workshops☆24Updated 2 years ago
- R package to estimate kinship and FST from SNP data☆21Updated last year
- Devel repository for bsseq☆39Updated last month
- R package for Inference of differentially methylated regions (DMRs) from bisulfite sequencing☆62Updated 7 months ago
- Representation and manipulation of genomic intervals☆46Updated 3 weeks ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Bayesian hierarchical model for complex trait analysis☆46Updated last year
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated last month
- ☆22Updated 8 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- R interface to the JBrowse 2 Linear Genome View.☆39Updated last year