wassermanlab / JASPAR-UCSC-tracksLinks
Code and data used to create the JASPAR UCSC Genome Browser tracks data hub
☆18Updated 2 weeks ago
Alternatives and similar repositories for JASPAR-UCSC-tracks
Users that are interested in JASPAR-UCSC-tracks are comparing it to the libraries listed below
Sorting:
- ☆23Updated 10 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 4 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- ☆34Updated last month
- A tool for annotation-free differential analysis of tissue-specific pre-mRNA alternative splicing patterns☆29Updated 2 years ago
- Create a *de novo* alternative splicing database, validate splicing events, and quantify percent spliced-in (Psi) from RNA seq data☆67Updated 5 years ago
- Disambiguation algorithm for reads aligned to human and mouse genomes using Tophat or BWA mem☆31Updated 7 years ago
- Tutorials covering various topics in genomic data analysis.☆16Updated 7 years ago
- Bead-based single-cell atac processing☆33Updated 4 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆42Updated last year
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 5 years ago
- Snakemake pipeline for running MAJIQ☆23Updated 2 years ago
- processes GoT amplicon data and generates a table of metrics☆32Updated 3 years ago
- MAnorm2 for Normalizing and Comparing ChIP-seq Samples☆31Updated 3 years ago
- Peak caller for CUT&TAG data☆29Updated 3 years ago
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year
- Machine learning algorithm to predict biological pathway relationships based on functional genomics networks☆20Updated 7 years ago
- simplified cellranger for long-read data☆19Updated 4 months ago
- Scripts to import your FeatureCounts output into DEXSeq☆34Updated 7 years ago
- A rust framework to make using alevin-fry even simpler☆60Updated 8 months ago
- GREAT Analysis - Functional Enrichment on Genomic Regions☆95Updated last week
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆31Updated last year
- ATAC-seq lab for BIOINF545☆24Updated 10 months ago
- ☆16Updated 8 years ago
- Methods for summarizing and visualizing multi-biosample functional genomic annotations☆46Updated 9 months ago
- Dirichlet Process based methods for subclonal reconstruction of tumours☆31Updated 9 months ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Updated 2 months ago
- An R interface to the MEME Suite☆54Updated 6 months ago