CBIIT / LDlinkRLinks
LDlinkR
☆60Updated last year
Alternatives and similar repositories for LDlinkR
Users that are interested in LDlinkR are comparing it to the libraries listed below
Sorting:
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆99Updated 3 months ago
- Reading, querying and writing GWAS summary data in VCF format☆85Updated 3 months ago
- Genetics ToolboX R package☆32Updated 5 years ago
- R package for quality control of plink genetic datasets☆59Updated last week
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆68Updated 11 months ago
- ☆48Updated 3 months ago
- ☆18Updated 7 years ago
- Colocalization analysis of genetic association signals☆54Updated 3 months ago
- R package for working in the UK Biobank Research Analysis Platform (RAP)☆66Updated 2 months ago
- Quantify and interpret divers of variation in multilevel gene expression experiments☆66Updated last month
- FOCUS: Fine-mapping Of CaUsal gene Sets☆46Updated 2 years ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 6 months ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆25Updated 4 years ago
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆49Updated 6 months ago
- Upgrade to coloc☆13Updated 7 years ago
- LocusCompareR is a R package with visualization tools for comparing two genetic association datasets.☆115Updated 2 years ago
- A General Framework for Consensus Partitioning☆63Updated 7 months ago
- Software implementing the Latent Causal Variable Model☆63Updated 5 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆33Updated 3 months ago
- Identify and correct invalid gene symbols☆59Updated 10 months ago
- An R package for performing STAAR procedure in whole-genome sequencing studies☆95Updated 7 months ago
- An R package for creating mirrored Manhattan plots☆18Updated 2 years ago
- ☆36Updated 4 years ago
- Code for implementing Mendelian randomization investigations☆18Updated 9 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆28Updated 2 weeks ago
- Make LocusZoom-like plots with your own LD matrix.☆44Updated 3 years ago
- Analyses conducting GWAS across the UKBB diverse superpopulations☆53Updated 4 months ago
- Visualise correlation results and test significancies of these☆23Updated 5 years ago