CBIIT / LDlinkRLinks
LDlinkR
☆59Updated last year
Alternatives and similar repositories for LDlinkR
Users that are interested in LDlinkR are comparing it to the libraries listed below
Sorting:
- Reading, querying and writing GWAS summary data in VCF format☆82Updated 2 weeks ago
- topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple p…☆66Updated 8 months ago
- Harmonise GWAS summary statistics against a reference VCF☆41Updated 4 years ago
- FOCUS: Fine-mapping Of CaUsal gene Sets☆45Updated last year
- gwasrapidd: an R package to query, download and wrangle GWAS Catalog data☆96Updated 3 weeks ago
- ☆48Updated last month
- ☆35Updated 4 years ago
- Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"☆23Updated 3 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆53Updated 4 years ago
- Genetics ToolboX R package☆32Updated 5 years ago
- Regional association plots☆26Updated last year
- Colocalization analysis of genetic association signals☆53Updated last week
- Fine-tuning polygenic risk score models using GWAS summary statistics☆52Updated 3 months ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- Regional association plots☆25Updated last year
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆32Updated last year
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆31Updated last week
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆27Updated this week
- Easily download publicly available GWAS summary statistics.☆76Updated last year
- Code for GBMI trans-ancestry proteome Mendelian randomization satellite paper☆18Updated last year
- Analyses conducting GWAS across the UKBB diverse superpopulations☆50Updated last month
- corrplot of LDSC genetic correlation results☆51Updated 3 years ago
- A collection of various utilities for GWAS summary statistics☆27Updated last year
- PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank☆19Updated 2 years ago
- R package for quality control of plink genetic datasets☆59Updated 2 weeks ago
- GENI plots to visualise results from genome-wide association studies☆28Updated 8 months ago
- ☆18Updated 7 years ago
- Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)☆23Updated 5 years ago
- ☆33Updated 2 years ago
- Upgrade to coloc☆13Updated 6 years ago