jessicawleigh / popart-currentLinks
☆22Updated 4 years ago
Alternatives and similar repositories for popart-current
Users that are interested in popart-current are comparing it to the libraries listed below
Sorting:
- Automatically exported from code.google.com/p/prottest3☆38Updated 7 years ago
- Visualize whole genome alignments as linear maps☆73Updated 3 months ago
- Generates an NCBI .tbl file of annotations on a genome.☆68Updated 7 years ago
- Synteny Imager☆65Updated last week
- ☆33Updated 4 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆50Updated last year
- TSEBRA: Transcript Selector for BRAKER☆48Updated 11 months ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆59Updated 2 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- ☆66Updated this week
- Conditional Reciprocal Best Blast☆42Updated 8 years ago
- EnTAP is moving to GitLab for future changes https://gitlab.com/PlantGenomicsLab/EnTAP☆41Updated 9 months ago
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆57Updated 2 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆63Updated 5 years ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆46Updated 3 months ago
- orthology assignment using phylogenetic and network analyses☆49Updated 2 weeks ago
- Automated de novo assembly of whole chloroplast genomes.☆47Updated last year
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆34Updated last year
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆75Updated 4 years ago
- A Windows Graphical Platform for Batch Manipulation of Tremendous Amount of Sequence Data☆30Updated 4 years ago
- k-mer learning materials☆80Updated 8 months ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- ☆53Updated 4 years ago
- Detecting natural selection from population-based genetic data☆28Updated 6 years ago
- MUM&Co is a simple bash script that uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆75Updated 2 months ago
- tools for assessing the accuracy of genome assemblies☆35Updated last year
- ☆45Updated 8 years ago
- HyPhy standalone analyses☆48Updated 2 months ago
- Python HyPhy: Facilitating HyPhy execution and parsing☆21Updated 3 years ago
- This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye…☆58Updated 4 years ago