jessicawleigh / popart-current
☆20Updated 3 years ago
Alternatives and similar repositories for popart-current:
Users that are interested in popart-current are comparing it to the libraries listed below
- Generates an NCBI .tbl file of annotations on a genome.☆66Updated 7 years ago
- Automated de novo assembly of whole chloroplast genomes.☆45Updated 6 months ago
- de.NBI Nanopore Training Course☆20Updated 2 years ago
- Adapter trimmer for Oxford Nanopore reads using ab initio method☆40Updated 4 months ago
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆71Updated 3 years ago
- Automatically exported from code.google.com/p/prottest3☆36Updated 7 years ago
- Improve the quality of a denovo assembly by scaffolding and gap filling☆56Updated 4 years ago
- Synteny Imager☆61Updated 7 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- Scripts to estimate genome size and coverage from kmer distribution generated by jellyfish☆56Updated 2 years ago
- ☆61Updated 2 weeks ago
- Pipelines and tools for the processing of ancient and modern HTS data.☆47Updated 2 weeks ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆53Updated last year
- ☆52Updated 3 years ago
- A massively parallel tool for model selection and tree inference on thousands of genes☆47Updated last year
- Fast k-mer based tool for multi locus sequence typing (MLST)☆44Updated 4 years ago
- dnaPipeTE (for de-novo assembly & annotation Pipeline for Transposable Elements), is a pipeline designed to find, annotate and quantify T…☆54Updated 2 years ago
- ☆32Updated 4 years ago
- ☆43Updated 8 years ago
- reference-based long read assemblies of bacterial genomes☆47Updated 3 years ago
- TSEBRA: Transcript Selector for BRAKER☆47Updated 4 months ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- Rank-based Gene Ontology analysis of gene expression data☆41Updated 2 years ago
- Visualize whole genome alignments as linear maps☆71Updated 6 months ago
- Given a reference, PhaME extracts SNPs from complete genomes, draft genomes and/or reads. Uses SNP multiple sequence alignment to constr…☆31Updated last year
- Conditional Reciprocal Best Blast☆42Updated 8 years ago
- catalog for long-read sequencing tools☆32Updated 2 years ago
- SelectionHapStats is a repository of Python scripts written to identify natural selection events in the genome and R scripts written to v…☆26Updated 6 years ago
- In-depth characterization and annotation of differences between two sets of DNA sequences☆60Updated 4 years ago
- General purpose population genetics software☆12Updated 5 years ago