cancerit / telomerecatLinks
Telomerecat: The telomere computational analysis tool
☆21Updated 4 years ago
Alternatives and similar repositories for telomerecat
Users that are interested in telomerecat are comparing it to the libraries listed below
Sorting:
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- ☆24Updated last year
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated last week
- Integrative analysis of complex structural variants☆22Updated 5 years ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 8 months ago
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated last year
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆20Updated 3 weeks ago
- ☆20Updated 3 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 9 months ago
- Structural variant VCF annotation, duplicate removal and comparison☆34Updated 2 months ago
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆22Updated last year
- ☆26Updated 8 months ago
- ☆37Updated 6 years ago
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- R package for DNA methylation analysis☆19Updated last year
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆13Updated 3 years ago
- A software for calculating telomere length☆72Updated 7 years ago
- ☆51Updated 6 years ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆31Updated 4 months ago
- A program for summarising CpG methylation patterns☆20Updated 9 years ago
- ☆18Updated 4 years ago
- ☆38Updated 2 years ago
- Long-read splice alignment with high accuracy☆64Updated last year
- Two pass alignment for long reads☆22Updated 4 years ago
- Copy Number Variation Detection In Next-generation sequencing Gene panels was designed for small (single-exon) copy number variation (CNV…☆21Updated 5 years ago
- Enabling differential allele-specific analysis☆11Updated 11 months ago
- Viola is a flexible and powerful python package designed specifically for analysis of genomic structural variant (SV) signatures.☆26Updated last year
- A/B compartments for 12 cancer types estimated from TCGA methylation data☆20Updated 8 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- TEMP is a software package for detecting transposable elements (TEs) insertions and excisions from pooled high-throughput sequencing dat…☆22Updated 8 years ago