cancerit / telomerecatLinks
Telomerecat: The telomere computational analysis tool
☆21Updated 4 years ago
Alternatives and similar repositories for telomerecat
Users that are interested in telomerecat are comparing it to the libraries listed below
Sorting:
- novoBreak: local assembly for breakpoint detection in cancer genomes☆26Updated 7 years ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆41Updated this week
- ☆23Updated 8 months ago
- Long read to rMATS☆32Updated 2 years ago
- Structural variant VCF annotation, duplicate removal and comparison☆33Updated 6 months ago
- Pipeline for structural variation detection in cohorts☆49Updated 3 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 5 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 4 months ago
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated 2 weeks ago
- R package for DNA methylation analysis☆19Updated last year
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- Enabling differential allele-specific analysis☆11Updated 8 months ago
- Integrative analysis of structural variations.☆40Updated last year
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆29Updated last year
- ☆19Updated 2 years ago
- ☆25Updated last year
- Integrative analysis of complex structural variants☆22Updated 4 years ago
- ☆23Updated 4 months ago
- Suite of tools for analysing off-target reads to find CNVs, homozygous regions, and shared haplotypes☆30Updated 2 weeks ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 11 months ago
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆17Updated 2 years ago
- Fast and scalable variant annotation tool☆30Updated 3 years ago
- Python package and routines for merging VCF files☆29Updated 4 years ago
- Immuological gene typing and annotation for genome assembly☆37Updated 5 months ago
- Functions to compare a SV call sets against a truth set.☆30Updated 2 months ago
- ☆17Updated last year
- Allele-specific copy number estimation with whole genome sequencing☆23Updated last year
- Software to assemble contigs/scaffolds into chromosomes using Hi-C data☆28Updated 11 months ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆42Updated last month