lasersonlab / phip-stat
Analysis tools for PhIP-seq experiments
☆12Updated 3 years ago
Alternatives and similar repositories for phip-stat
Users that are interested in phip-stat are comparing it to the libraries listed below
Sorting:
- Bayesian enrichment estimation in R☆11Updated 2 years ago
- 🐶 hlabud: HLA genotype analysis in R☆16Updated last month
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Updated 3 months ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆16Updated 3 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- Kinship In Mixed Model Analysis of RNA-seq☆12Updated 3 weeks ago
- FREE Divergence Error-Correcting DNA Barcodes☆8Updated 6 years ago
- An R package to increase interpretability of genes and SNPs (eg identified from GWAS and eQTL mapping)☆10Updated 2 years ago
- An alignment and analysis pipeline for Ribosome Profiling and RNA-seq data☆13Updated 10 months ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- ☆18Updated 6 months ago
- ☆13Updated 2 years ago
- k-mer similarity analysis pipeline☆21Updated last week
- CLI to automate Nextflow pipeline testing☆12Updated 2 months ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆18Updated 3 weeks ago
- ☆19Updated 5 months ago
- Easy & parallel download of FASTQ files from public repositories (SRA, EGA, GDC)☆8Updated last month
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated last year
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 6 months ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 11 months ago
- Nanopore Real-Time Analysis Tool☆15Updated 8 months ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Updated 6 months ago
- Machine learning use cases for teaching☆13Updated 7 years ago
- ☆12Updated 3 weeks ago
- Clonal reconstruction from HTS data☆10Updated 3 years ago
- ☆12Updated 4 months ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated last year
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆11Updated 3 years ago
- EARRINGS: An efficient and ingenious adapter removal design for large-scale NGS meta-analyses☆9Updated last week
- ☆10Updated 6 years ago