lasersonlab / phip-statLinks
Analysis tools for PhIP-seq experiments
☆12Updated 4 years ago
Alternatives and similar repositories for phip-stat
Users that are interested in phip-stat are comparing it to the libraries listed below
Sorting:
- 🐶 hlabud: HLA genotype analysis in R☆17Updated 9 months ago
- Bayesian enrichment estimation in R☆11Updated 2 months ago
- TFregulomeR reveals transcription factors’ context-specific features and functions☆15Updated 3 years ago
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆12Updated last year
- FREE Divergence Error-Correcting DNA Barcodes☆10Updated 7 years ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Updated 7 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal data☆13Updated this week
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆29Updated 8 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13Updated 2 years ago
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- methylR: a single shiny solution from sequencer data to pathway analysis☆12Updated last year
- ☆26Updated 5 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Updated 7 months ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆24Updated 4 years ago
- Rapid and accurate ancestry inference using SNVs.☆28Updated 5 months ago
- Generate Novel Insights from Gene Correlation Data☆13Updated 3 years ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆30Updated 2 years ago
- interactive plots for differential expression analysis☆34Updated 7 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ☆29Updated 2 years ago
- ESTIMATE tumor infiltration, the tidy way☆17Updated 2 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆21Updated 3 months ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆19Updated 4 months ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆17Updated last year
- Isoform-level functional RNA-Seq analysis 🧬☆36Updated 2 months ago
- Code to reproduce analysis in "Addressing confounding artifacts in reconstruction of gene co-expression networks"☆16Updated 6 years ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Updated 3 years ago