A new graphical interface for RAxML
☆23Apr 3, 2026Updated this week
Alternatives and similar repositories for raxmlGUI
Users that are interested in raxmlGUI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.☆15Feb 24, 2025Updated last year
- This is a simple introductory tutorial to help you get started with using BEAST2 and its accomplices.☆11Jul 8, 2025Updated 9 months ago
- Quality control for phylogenetic analyses☆13Mar 16, 2026Updated 3 weeks ago
- WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.☆13Nov 18, 2025Updated 4 months ago
- MPBoot: Fast phylogenetic maximum parsimony tree inference and bootstrap approximation☆21Dec 4, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Posterior summarisation in Bayesian phylogenetics☆70Sep 27, 2025Updated 6 months ago
- PhyloBayes: phylogenetic reconstruction using infinite mixtures (CAT and CAT-GTR) -- serial version (for MPI, see pbmpi.git)☆15Oct 21, 2021Updated 4 years ago
- Pipeline for metagenome and metatranscriptome joint assembly☆20Mar 3, 2023Updated 3 years ago
- Clade age estimation using a Bayesian Brownian bridge model☆15Sep 3, 2025Updated 7 months ago
- Bayesian neural networks using Numpy and Scipy☆12Nov 24, 2025Updated 4 months ago
- ☆16May 13, 2022Updated 3 years ago
- ☆16Feb 20, 2024Updated 2 years ago
- KBase distribution module for RASTtk.☆13Sep 14, 2020Updated 5 years ago
- A Rust-based library for phylogenetic analysis and manipulation☆17Feb 10, 2026Updated last month
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- a bioinformatics tool for simulating single-cell genome sequencing data☆10Dec 19, 2019Updated 6 years ago
- A program for estimating extinction probability and date for a given set of species, based on IUCN threat assessments☆15Jun 21, 2023Updated 2 years ago
- PartitionFinder discovers optimal partitioning schemes for DNA sequences.☆71Mar 10, 2021Updated 5 years ago
- A program for divvying or partially filtering multiple sequence alignments☆28Oct 14, 2019Updated 6 years ago
- The EnsembleVariantCallingPipeline takes files in FASTQ or BAM format and performs SNV and INDEL variant calling from 4 variant callers (…☆14Jul 24, 2025Updated 8 months ago
- GPU-accelerated DNA barcode classification☆13Jan 2, 2025Updated last year
- This is the repository for SeCNV, a single cell copy number profiling tool.☆12Dec 12, 2024Updated last year
- TreeCmp: comparison of trees in polynomial time☆14Aug 25, 2025Updated 7 months ago
- ☆15Feb 5, 2025Updated last year
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Code used to generate the results in "Somatic chronology of treatment-resistant prostate cancer via deep whole-genome ctDNA sequencing"☆16Mar 11, 2024Updated 2 years ago
- Ensemble of HMM methods (SEPP, TIPP, UPP)☆95Aug 11, 2025Updated 7 months ago
- NeXML is an exchange standard for representing phyloinformatic data.☆15Feb 23, 2017Updated 9 years ago
- Bacterial analysis toolbox for full ESKAPE pathogen characterization and profiling the resistome, mobilome, virulome & phylogenomics usin…☆26Jan 30, 2025Updated last year
- Fast implementation of the Neighbour-Joining method for phylogenetic inference☆18Sep 10, 2024Updated last year
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Oct 27, 2020Updated 5 years ago
- Quartet-based species tree and tree of blob estimation☆16Feb 10, 2026Updated last month
- ☆16Aug 11, 2021Updated 4 years ago
- ☆22Dec 9, 2025Updated 4 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Data Structures for Bioinformatics - LM Bioinformatics - University of Rome Tor Vergata☆11Feb 27, 2026Updated last month
- R library for analyzing, time-scaling and simulating phylogenies of extinct/fossil lineages. Also plots diversity curves for stratigraphi…☆22Apr 1, 2026Updated last week
- VILOCA: VIral LOcal haplotype reconstruction and mutation CAlling for short and long read data☆23Oct 21, 2025Updated 5 months ago
- Synteny matrix representation with maximum likelihood pipeline☆16Jul 7, 2021Updated 4 years ago
- an ensemble usage of MAFFT-linsi --add on large datasets☆13May 31, 2024Updated last year
- forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research☆37Apr 1, 2026Updated last week
- Tao Liu's open source libraries for bioinformatics (unstable, pre-alpha)☆26Mar 23, 2021Updated 5 years ago