Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
☆93Feb 3, 2025Updated last year
Alternatives and similar repositories for ProGen2-finetuning
Users that are interested in ProGen2-finetuning are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The first large protein language model trained follows structure instructions.☆101May 20, 2025Updated last year
- ☆13Sep 29, 2023Updated 2 years ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆75Jul 2, 2025Updated last year
- ☆27Feb 10, 2024Updated 2 years ago
- ☆12Aug 26, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Official release of the ProGen models☆64Jan 29, 2025Updated last year
- ☆13Jul 14, 2023Updated 2 years ago
- Public Release of ProGen3 family of Models☆111Jul 21, 2025Updated 11 months ago
- Aligning protein generative models with experimental fitness☆124Mar 12, 2026Updated 3 months ago
- Official release of the ProGen models☆704Jun 2, 2026Updated last month
- Gibbs sampling for generating protein sequences☆58Jan 17, 2025Updated last year
- ☆11Sep 27, 2022Updated 3 years ago
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆671Jan 15, 2026Updated 5 months ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆365Jun 11, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 4 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆69May 28, 2026Updated last month
- PyPEF – Pythonic Protein Engineering Framework☆16Updated this week
- ☆22Dec 15, 2024Updated last year
- ☆217Sep 24, 2024Updated last year
- Protein representation and design under a single training scheme☆24May 17, 2026Updated last month
- ☆113Updated this week
- Machine learning prediction of enzyme optimum pH☆55Apr 29, 2025Updated last year
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction tools☆18Nov 19, 2024Updated last year
- Implementation of Evolutionary and Metropolis Hastings Monte Carlo for text based (e.g. nucleotide/peptide) sequences☆13Mar 7, 2024Updated 2 years ago
- ☆12Dec 2, 2024Updated last year
- ML-guided enzyme engineering☆82Apr 13, 2026Updated 2 months ago
- Adapting protein language models for structure-conditioned design☆42Aug 5, 2024Updated last year
- ☆63Apr 9, 2024Updated 2 years ago
- Controllable Protein Sequence Generation with LLM Preference Optimization, AAAI 2025☆16Mar 10, 2025Updated last year
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆13Nov 14, 2025Updated 7 months ago
- DyNoPy☆11Sep 5, 2024Updated last year
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Official repository for the ProteinGym benchmarks☆445Mar 25, 2026Updated 3 months ago
- ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model (Connecting text and protein)☆208May 15, 2026Updated last month
- ☆15Mar 28, 2025Updated last year
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆610Mar 8, 2026Updated 4 months ago
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆104Oct 16, 2023Updated 2 years ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 8 months ago
- Making Protein Design accessible to all via Google Colab!☆922Apr 6, 2026Updated 3 months ago