hugohrban / ProGen2-finetuning
Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.
☆57Updated 3 months ago
Alternatives and similar repositories for ProGen2-finetuning:
Users that are interested in ProGen2-finetuning are comparing it to the libraries listed below
- open source code for Tencent tFold☆97Updated last month
- ☆62Updated 3 years ago
- Fitness landscapes for antibodies☆69Updated 3 months ago
- Learning the language of protein-protein interactions☆72Updated 2 weeks ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆37Updated 8 months ago
- Efficient implementatin of ESM family.☆55Updated 3 months ago
- Code for humanization of antibody and nanobody☆39Updated 5 months ago
- Aligning protein generative models with experimental fitness☆92Updated 6 months ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆71Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆50Updated 4 months ago
- ☆111Updated last week
- Public repository describing training and testing of AntiBERTa.☆58Updated 2 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆113Updated last month
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆59Updated 11 months ago
- AlphaBind code + model accompanying pre-print☆52Updated 4 months ago
- ☆35Updated last year
- ☆104Updated 9 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆27Updated 8 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆70Updated 6 months ago
- ☆43Updated last year
- PLM based active learning model for protein engineering☆78Updated 9 months ago
- Generative Language Modeling for Antibody Design☆148Updated 7 months ago
- Code for ProSST: A Pre-trained Protein Sequence and Structure Transformer with Disentangled Attention. (NeurIPS 2024)☆113Updated 2 months ago
- Nucleic Acids Research 2024:RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆60Updated 9 months ago
- ☆49Updated last month
- ☆38Updated 3 months ago
- Protein language model trained on coding DNA☆47Updated 6 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆32Updated 5 months ago
- ☆67Updated 7 months ago