google-deepmind / nuclease_design
ML-guided enzyme engineering
☆62Updated last month
Alternatives and similar repositories for nuclease_design
Users that are interested in nuclease_design are comparing it to the libraries listed below
Sorting:
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆54Updated 2 months ago
- Structure prediction of alternative protein conformations☆75Updated 2 months ago
- ☆60Updated this week
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆56Updated 6 months ago
- ☆47Updated 6 months ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆118Updated last month
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆121Updated last month
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- ProtMamba: a homology-aware but alignment-free protein state space model☆62Updated last month
- ☆66Updated last month
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 4 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆35Updated this week
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆43Updated last month
- Template-based protein design with Raygun☆60Updated last week
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆70Updated 6 months ago
- Improved antibody structure-based design using inverse folding☆116Updated this week
- Official repository of EnzymeFlow☆90Updated 5 months ago
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆94Updated 9 months ago
- ☆103Updated 2 years ago
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆28Updated last year
- Text-guided protein design☆49Updated last month
- Adapting protein language models for structure-conditioned design☆38Updated 9 months ago
- ☆45Updated this week
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆55Updated 3 weeks ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆90Updated 2 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆34Updated 5 months ago
- Directed evolution of proteins in sequence space with gradients☆86Updated 9 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆42Updated 5 months ago