google-deepmind / nuclease_designLinks
ML-guided enzyme engineering
☆67Updated last month
Alternatives and similar repositories for nuclease_design
Users that are interested in nuclease_design are comparing it to the libraries listed below
Sorting:
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆62Updated this week
- Protein Design by Machine Learning guided Directed Evolution☆45Updated 5 months ago
- Structure-conditioned masked language modeling for protein sequence design☆69Updated last year
- Model for predicting micro-millisecond motions from protein sequence and/or structure☆59Updated last month
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆112Updated 3 months ago
- A generalized computational framework for biomolecular modeling.☆231Updated last week
- ☆85Updated 3 weeks ago
- ☆123Updated last year
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆83Updated 3 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆136Updated 5 months ago
- Structure prediction of alternative protein conformations☆78Updated 6 months ago
- 🧬 Augmenting zero-shot mutant prediction by retrieval-based logits fusion. (ISMB/ECCB 2025)☆97Updated 3 weeks ago
- Central repository for biomolecular foundation models with shared trainers and pipeline components☆138Updated last week
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆59Updated last month
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated 2 months ago
- ☆67Updated 10 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆42Updated last week
- ☆71Updated 5 months ago
- Joint Sequence-Structure Generation of Nucleic Acid and Protein Complexes with SE(3)-Discrete Diffusion☆58Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- Official repository of EnzymeFlow☆94Updated 9 months ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆78Updated 3 months ago
- Consolidated repository to perform RLXF☆33Updated 4 months ago
- A comprehensive benchmark on the performances of multiple protein backbone generative models.☆64Updated 3 months ago
- Improved antibody structure-based design using inverse folding☆135Updated 3 weeks ago
- Directed evolution of proteins in sequence space with gradients☆87Updated last year
- The software system of improving AlphaFold2- and AlphaFold-Multimer-based protein tertiary & quaternary structure prediction. It was deve…☆29Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆151Updated last month
- Template-based protein design with Raygun☆72Updated last week