☆14Jul 14, 2023Updated 2 years ago
Alternatives and similar repositories for GVP-MSA
Users that are interested in GVP-MSA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Deep learning based prediction of temperature dependent enzyme turnover rates☆17Nov 24, 2024Updated last year
- ☆20Oct 4, 2022Updated 3 years ago
- ☆18Jan 2, 2025Updated last year
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Mar 21, 2024Updated 2 years ago
- ☆11Mar 12, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- off-targeting assessment of Cas9 gRNAs☆15Apr 27, 2021Updated 5 years ago
- ☆22Dec 15, 2022Updated 3 years ago
- Transformer for protein function prediction (version 2)☆14Jan 8, 2026Updated 4 months ago
- Implementation of Protein Invariant Point Packer (PIPPack)☆35May 28, 2024Updated 2 years ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- Fully convolutional deep learning variant effect predictor architecture☆23Jan 3, 2024Updated 2 years ago
- Code for paper "ToxIBTL: prediction of peptide toxicity based on information bottleneck and transfer learning"☆13Jan 24, 2022Updated 4 years ago
- Scripts and data to run AbDesign as described in Tools for protein science 2021☆14Nov 4, 2020Updated 5 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆15Jan 23, 2026Updated 4 months ago
- ☆18Mar 13, 2024Updated 2 years ago
- Bayesian Optimization with Pretrained Protein Sequence Models☆56Jul 27, 2024Updated last year
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆91Feb 3, 2025Updated last year
- Implementation of the Pairformer model used in AlphaFold 3☆14Updated this week
- ☆74Feb 13, 2026Updated 3 months ago
- Metal and Water prediction☆14Feb 5, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆47Sep 16, 2024Updated last year
- A generative latent variable model for biological sequence families.☆250Mar 15, 2022Updated 4 years ago
- Plot multiple sequence alignment (MSA)☆17Apr 21, 2026Updated last month
- ☆22Dec 15, 2024Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Aug 10, 2023Updated 2 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 6 years ago
- We introduce a differentiable approach to phylogenetic tree construction, optimizing tree and ancestral sequences in its original represe…☆20Apr 2, 2026Updated last month
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆107Apr 15, 2026Updated last month
- ☆19Mar 27, 2026Updated 2 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆31Dec 12, 2024Updated last year
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆18Feb 8, 2024Updated 2 years ago
- PiViewer: an open-source tool for automated detection and display of pi-pi interactions☆14Jun 6, 2018Updated 7 years ago
- Local homology search powered by ESM-2 language model, foldseek, hhsuite, and hmmer.☆18Jan 14, 2025Updated last year
- ☆20Oct 18, 2024Updated last year
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆43Mar 7, 2025Updated last year
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆36Nov 18, 2023Updated 2 years ago