PyPEF – Pythonic Protein Engineering Framework
☆16Jun 15, 2026Updated last week
Alternatives and similar repositories for PyPEF
Users that are interested in PyPEF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Some scripts that I keep using over and over.☆21Jul 5, 2025Updated 11 months ago
- PyPEF – Pythonic Protein Engineering Framework☆26Sep 20, 2025Updated 9 months ago
- ☆16Sep 29, 2025Updated 8 months ago
- random colab notebooks for biology☆26Aug 23, 2025Updated 10 months ago
- ProteinReDiff: Complex-based ligand-binding proteins redesign by equivariant diffusion-based generative models☆39Nov 25, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://pr…☆44Jun 19, 2026Updated last week
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- Nature color palette optimized for color-blind individuals☆20Aug 13, 2023Updated 2 years ago
- Code and software used to design de novo protein nanomachines. Supplementary material for "Computational design of nanoscale rotational m…☆10Mar 19, 2022Updated 4 years ago
- Private. Liberated. Nuanced.☆25Jun 17, 2024Updated 2 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated 11 months ago
- protein docking stuff☆52Apr 2, 2026Updated 2 months ago
- ☆15Mar 28, 2025Updated last year
- ☆91Nov 25, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Implements the "client" side of OAuth 2.0.☆11Apr 17, 2011Updated 15 years ago
- ☆27Feb 10, 2024Updated 2 years ago
- Official repository for the ProteinDJ protein design pipeline☆122Mar 26, 2026Updated 3 months ago
- CNV Rapid Aberration Detection And Reporting☆12Mar 2, 2021Updated 5 years ago
- GREMLIN is a method to learn a statistical model of a protein family that captures both conservation and co-evolution patterns in the fam…☆25Jul 3, 2016Updated 9 years ago
- ☆47Sep 16, 2024Updated last year
- A Collection of Platform, Tools, and Resources for Antibody Engineering☆21Jun 30, 2023Updated 2 years ago
- The Nutmeg machine learning models☆11Jan 23, 2025Updated last year
- PyTorch implementation for our paper "Proximal Exploration for Model-guided Protein Sequence Design"☆38Aug 7, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- A python module to plot secondary structure schemes☆26Mar 18, 2026Updated 3 months ago
- Generative diverse protein backbones by protein language model☆35Feb 27, 2026Updated 4 months ago
- Bayesian Optimization with Pretrained Protein Sequence Models☆56Jul 27, 2024Updated last year
- MegEngine implementation of Diffusion Models.☆19Aug 8, 2022Updated 3 years ago
- Machine learning models for antibody sequences in PyTorch☆41May 25, 2021Updated 5 years ago
- ☆30Mar 14, 2026Updated 3 months ago
- 2D portraits of 3D protein structures☆27May 14, 2026Updated last month
- ☆30Aug 8, 2025Updated 10 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Machine learning model for predicting Human Oral Bioavailability☆13Dec 16, 2021Updated 4 years ago
- ☆16Jun 11, 2021Updated 5 years ago
- Design a local part of a protein☆20Jan 12, 2023Updated 3 years ago
- a pytorch version for GREMLIN, used to predict the protein contacts by coevolution method.☆17May 30, 2021Updated 5 years ago
- some tools for working with protein (PDB) files in tensorflow☆11Jul 9, 2019Updated 6 years ago
- ☆74Feb 13, 2026Updated 4 months ago
- Text-guided protein design☆94Jun 22, 2026Updated last week