masoudk / AsiteDesign
☆13Updated last year
Alternatives and similar repositories for AsiteDesign:
Users that are interested in AsiteDesign are comparing it to the libraries listed below
- Extension of ThermoMPNN for double mutant predictions☆19Updated this week
- Binding pocket optimization based on force fields and docking scoring functions☆30Updated last month
- Repo for the publication titled: "Key Interaction Networks: Identifying Evolutionarily Conserved Non-Covalent Interaction Networks Across…☆12Updated last year
- scripts to find PBD structures for cancer driver proteins☆29Updated this week
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆14Updated last week
- DyNoPy☆11Updated 4 months ago
- ☆8Updated last year
- ☆15Updated 2 months ago
- DSDPFlex: Flexible-Receptor Docking with GPU Acceleration☆20Updated last month
- bakerlab pymol scripts☆9Updated 4 years ago
- ☆14Updated 2 weeks ago
- Graphormer Based Protein Sequence Design☆24Updated 11 months ago
- ☆15Updated last month
- Codes and scripts for "An artificial intelligence accelerated virtual screening platform for drug discovery"☆45Updated last month
- Some scripts that I keep using over and over.☆18Updated 2 weeks ago
- PackDock: a Diffusion Based Side Chain Packing Model for Flexible Protein-Ligand Docking☆31Updated 3 months ago
- Code for humanization of antibody and nanobody☆34Updated last month
- Some Rosetta Scripts that allow for various simple tasks☆14Updated 4 years ago
- ☆24Updated this week
- A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins☆17Updated 11 months ago
- Guiding diffusion models for antibody sequence and structure co-design with developability properties.☆30Updated 2 months ago
- CArbohydrate-Protein Site IdentiFier☆10Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆39Updated last month
- ☆14Updated 3 months ago
- ☆13Updated 2 months ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆20Updated last year
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆15Updated last year
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆31Updated last year