Alternatives and similar repositories for AsiteDesign

Users that are interested in AsiteDesign are comparing it to the libraries listed below

• lauramarie99 / ProtDesign2
  ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN
  ☆15Updated 3 months ago
• ZhuofanShen / Rosetta-Enzyme-Design-Pipeline
  ☆9Updated last month
• LongxingCao / pymol_scripts
  bakerlab pymol scripts
  ☆23Updated 5 years ago
• ELELAB / PDBminer
  scripts to find PBD structures for cancer driver proteins
  ☆31Updated 4 months ago
• Hoecker-Lab / pocketoptimizer
  Binding pocket optimization based on force fields and docking scoring functions
  ☆33Updated 3 months ago
• ikalvet / heme_binder_design
  ☆9Updated last year
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆33Updated 3 months ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆23Updated last year
• meilerlab / probabilities_design
  ☆13Updated 2 months ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆26Updated 3 weeks ago
• bunzela / AIzymes
  ☆35Updated last week
• MolecularAI / PepINVENT
  ☆37Updated 3 months ago
• ohuelab / ColabDesign-cyclic-binder
  ☆32Updated last year
• Ryan-Hu-Hu-Hu / GRACE
  GRACE: Generative Renaissance in Artificial Computational Enzyme Design
  ☆18Updated 5 months ago
• skalyaanamoorthy / PSLMs
  ☆19Updated 7 months ago
• alepandini / DyNoPy
  DyNoPy
  ☆11Updated 9 months ago
• AndersJing / RaptorX-Single
  ☆20Updated last year
• BioComputingUP / ring-pymol
  This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua
  ☆27Updated 4 months ago
• iamysk / AFsample2
  Modelling protein conformational landscape with Alphafold
  ☆51Updated 2 weeks ago
• anirudhvenk / antibody-dpo
  ☆22Updated last month
• atommoyer / stapler
  A Motif Hash Based Method for Matching Crosslinkers into Peptides and Proteins
  ☆18Updated last year
• Gonglab-THU / GDFold2
  ☆14Updated 6 months ago
• Graylab / CAPSIF
  CArbohydrate-Protein Site IdentiFier
  ☆11Updated last year
• matteoferla / pyrosetta-help
  Some scripts that I keep using over and over.
  ☆18Updated 5 months ago
• Wublab / pythia_ppi
  PPI version of Pythia
  ☆11Updated 7 months ago
• decodermu / GPD
  Graphormer Based Protein Sequence Design
  ☆24Updated last year
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆22Updated last year
• Junjie-Zhu / IDPFold
  IDPFold test version
  ☆21Updated 9 months ago
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆28Updated 3 weeks ago
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆30Updated 2 years ago