masoudk / AsiteDesignLinks
☆13Updated 2 years ago
Alternatives and similar repositories for AsiteDesign
Users that are interested in AsiteDesign are comparing it to the libraries listed below
Sorting:
- ☆10Updated this week
- scripts to find PBD structures for cancer driver proteins☆31Updated 2 weeks ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆22Updated 9 months ago
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 9 months ago
- bakerlab pymol scripts☆25Updated 5 years ago
- ☆26Updated 4 months ago
- Code for ApoDock☆21Updated 8 months ago
- ☆17Updated last year
- ☆37Updated 2 years ago
- Some scripts that I keep using over and over.☆21Updated 5 months ago
- ☆15Updated 9 months ago
- Controlling the usage of hydrophobic residues on AfDesign for binder peptide design with AlphaFold hallucination protocol☆33Updated 2 years ago
- Modelling protein conformational landscape with Alphafold☆54Updated 4 months ago
- DyNoPy☆11Updated last year
- This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua☆30Updated 3 months ago
- code for SeqDance/ESMDance, biophysics-informed protein language models☆41Updated 8 months ago
- Clustering of SES virtual probes for pocket generation and ranking via Isolation Forest☆13Updated 2 years ago
- This repository contains the AlphaCutter.py for the removal of non-globular regions from predicted protein structures.☆16Updated 2 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆46Updated 3 weeks ago
- Making Protein folding accessible to all!☆25Updated last year
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆18Updated last month
- ☆16Updated 6 months ago
- ☆21Updated last year
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Physical energy function for protein sequence design☆34Updated 2 years ago
- ☆25Updated 7 months ago
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 7 months ago
- Universal framework for physically based computational protein design☆35Updated 2 years ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 7 months ago
- Extension of ThermoMPNN for double mutant predictions☆49Updated 2 months ago