Alternatives and similar repositories for MaskedProteinEnT

Users that are interested in MaskedProteinEnT are comparing it to the libraries listed below

• Kuhlman-Lab / PIPPack
  Implementation of Protein Invariant Point Packer (PIPPack)
  ☆32Updated last year
• amelvim / antibody-diffusion-properties
  Guiding diffusion models for antibody sequence and structure co-design with developability properties.
  ☆33Updated 6 months ago
• A4Bio / FoldToken_open
  ☆18Updated 7 months ago
• johnyang101 / pmpnndiff
  Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion
  ☆17Updated last year
• sirius777coder / GPDL
  Generative diverse protein backbones by protein language model
  ☆32Updated 5 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆35Updated 8 months ago
• Merck / AbLEF
  Antibody Langauge Ensemble Fusion - fuses antibody structural ensemble and language representation for property prediction
  ☆11Updated last year
• LSSI-ETH / meta-learning-for-protein-engineering
  Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…
  ☆20Updated 9 months ago
• bzho3923 / CPDiffusion
  ☆23Updated 7 months ago
• RosettaCommons / AF2_peptide_hallucination
  Code for designing binders to flexible peptides with AlphaFold2 Hallucination
  ☆23Updated last year
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆48Updated 2 weeks ago
• issararab / PEvoLM
  Protein Sequence Evolutionary Information Language Model
  ☆12Updated last year
• brennanaba / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆32Updated 2 years ago
• Minys233 / Dynaformer
  ☆31Updated 11 months ago
• bwicky / oligomer_hallucination
  ☆35Updated last year
• shichence / ProtSeed
  Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"
  ☆24Updated last year
• BioinfoMachineLearning / EnQA
  A 3D-equivariant neural network for protein structure accuracy estimation
  ☆18Updated 2 years ago
• RosettaCommons / FvHallucinator
  ☆27Updated 2 years ago
• BioinfoMachineLearning / ATOMRefine
  3D equivariant graph transformer for all-atom refinement of protein tertiary structures
  ☆26Updated last year
• dgattiwsu / MD_without_molecules
  Molecular dynamics without molecules: searching the conformational space of proteins with generative neural networks
  ☆11Updated 2 years ago
• strauchlab / iNNterfaceDesign
  ☆19Updated 2 years ago
• mjendrusch / salad
  protein structure generation with sparse all-atom denoising models
  ☆32Updated this week
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆37Updated 2 months ago
• HannesStark / CodonMPNN
  ☆27Updated 5 months ago
• KoubaPetr / Flexpert
  Code for the paper "Learning to engineer protein flexibility".
  ☆18Updated 2 months ago
• LDeng0205 / confidence-bootstrapping
  Implementation of the Confidence Bootstrapping procedure for protein-ligand docking.
  ☆26Updated last year
• PKUliujl / GeoSeqBuilder
  ☆27Updated 4 months ago
• KrishnaswamyLab / ProtSCAPE
  ☆17Updated 8 months ago
• AspirinCode / GENiPPI
  Interface-aware molecular generative framework for protein-protein interaction modulators
  ☆14Updated 5 months ago
• DeepGraphLearning / esm-s
  Structure-Informed Protein Language Model
  ☆34Updated last year