homologus / Pandoras-Toolbox-for-Bioinformatics
A collection of well-known bioinformatics programs.
☆25Updated 9 years ago
Alternatives and similar repositories for Pandoras-Toolbox-for-Bioinformatics:
Users that are interested in Pandoras-Toolbox-for-Bioinformatics are comparing it to the libraries listed below
- Metagenomic profiling and phylogenetic distances via common kmers☆42Updated 3 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 2 months ago
- Biological Graphic tool in Python☆34Updated 4 years ago
- Run Picard on BAM files and collate 90 metrics into one file.☆39Updated 7 years ago
- Analysis from kallisto paper☆32Updated 9 years ago
- What's The Function of these genes?☆22Updated 7 years ago
- A tool to benchmark mappers and different parameters within minutes☆43Updated 5 years ago
- Parallel merging, squaring off and ensemble calling for genomic variants☆20Updated 5 years ago
- Scripts for implementing read until and other examples.☆31Updated 5 years ago
- Estimate damage in standard NGS library preparation. Incompatible with library preparation methods from which the imbalance is lost (such…☆51Updated 7 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated last year
- smCounter: a versatile UMI-aware variant caller to detect both somatic and germline SNVs and indels. Published in article "Detecting very…☆20Updated 5 years ago
- Tools for bam file processing☆55Updated 9 years ago
- De novo transcriptome assembler for short reads☆62Updated 6 years ago
- High-performance error correction for Illumina resequencing data☆69Updated 8 years ago
- Miscellaneous Bioinformatics scripts etc mostly in Python☆45Updated last month
- ☆82Updated 3 years ago
- Q ChIP-seq peak caller☆18Updated 7 months ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- ☆37Updated 4 years ago
- Nanopore desc☆18Updated 8 years ago
- Bioinformatics tool outputs converter to JSON or YAML☆36Updated 3 months ago
- Guide to transcriptome assembly & analysis☆21Updated 7 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated 8 months ago
- NuDup -- Marks/removes duplicate molecules based on the molecular tagging technology used in Tecan products.☆14Updated 5 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- Tools to handle reads sequenced with unique molecular identifiers (UMIs).☆30Updated 7 years ago
- Developments in next generation sequencing: instruments, read lengths, throughput. See☆27Updated 6 years ago