drio / bio.brew
A tiny package manager for crucial unix and bioinformatics tools
☆27Updated 9 years ago
Related projects ⓘ
Alternatives and complementary repositories for bio.brew
- R Interface to the NCBI SRA metadata☆23Updated 5 years ago
- A program for fast and accurate genome-guided transcripts reconstruction and quantification from RNA-seq (Supporting Pacbio single-end)☆23Updated 3 years ago
- Docker image of JBrowse Genome Browser☆14Updated 3 years ago
- ☆13Updated 7 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆30Updated 4 months ago
- ☆19Updated 7 years ago
- Homebrew formulae for bioinformatics software only available for Linux☆27Updated 5 years ago
- Benchmarks for RNA-seq quantification pipelines☆8Updated 4 years ago
- Personal diploid genome creation and coordinate conversion☆21Updated last month
- fast webservices based query tool for large sets of genomic features☆25Updated last year
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 7 years ago
- Making Snakemake workflows into full-fledged command line tools since 1999.☆51Updated 6 years ago
- ☆10Updated 12 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated 5 months ago
- Qtip: a tandem simulation approach for accurately predicting read alignment mapping qualities☆25Updated 5 years ago
- Nextflow workshop 2018 -- Training pages -> https://nextflow-io.github.io/nf-hack18/☆18Updated 5 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆20Updated 4 years ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆23Updated 3 years ago
- "The who the what the huh?" is our pipeline for converting bcl files to fastq and performing QC.☆11Updated 2 years ago
- interactive plots for differential expression analysis☆25Updated 2 months ago
- BED QC tool (in the making)☆15Updated 2 years ago
- BigWig manpulation tools using libBigWig and htslib☆28Updated 3 months ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆25Updated 8 years ago
- A comprehensive toolkit for running Oxford Nanopore's MinION☆12Updated 6 years ago
- RNA-Seq pipeline☆34Updated 9 years ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 2 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 4 years ago
- Winter 2021, GGG 298 - Tools for Data Intensive Research - UC Davis☆12Updated 3 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- ☆10Updated 9 years ago