BioContainers / specs
BioContainers specifications
☆50Updated 2 years ago
Alternatives and similar repositories for specs:
Users that are interested in specs are comparing it to the libraries listed below
- Request for comments on interchangeable bioinformatics containers☆40Updated 5 years ago
- Galaxy RNA workbench☆39Updated 4 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- ☆82Updated 3 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- conda recipes for genomic data☆85Updated 3 years ago
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆97Updated last year
- Toil workflows for common genomic pipelines☆33Updated 5 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆82Updated 5 months ago
- integrated RNA-seq Analysis Pipeline☆85Updated 6 years ago
- Testing building mulled containers for multi-requirement tools.☆71Updated last week
- Analysis from kallisto paper☆32Updated 9 years ago
- Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface.☆112Updated 4 months ago
- Python biomart API☆65Updated last year
- CWL tools and workflows for GGR☆21Updated 3 years ago
- A 3'-end adapter contaminant trimmer☆93Updated 7 years ago
- The Genome Modeling System installer☆78Updated 9 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆65Updated 4 years ago
- Quality of RNA-Seq Toolset☆52Updated 5 years ago
- Ensembl tools☆34Updated 4 months ago
- Automatic Packaging and Distribution of Bioinformatics Pipelines☆26Updated 7 years ago
- Galaxy Github repository BETA 1. May be destroyed and recreated if post-conversion problems are found (but post-conversion commits on thi…☆12Updated 10 years ago
- Bioinformatics workflows developed for and used on the St. Jude Cloud project.☆35Updated 3 weeks ago
- Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.☆51Updated 6 years ago
- Chanjo provides a better way to analyze coverage data in clinical sequencing.☆50Updated 3 months ago
- ☆21Updated 4 years ago
- create, manage, and upload track hubs for use in the UCSC genome browser☆53Updated 11 months ago
- UC Santa Cruz Computational Genomics Lab's Toil-based RNA-seq pipeline☆40Updated 4 years ago
- ☆38Updated last month
- Collect of SO Ontologies☆99Updated 4 months ago