High throughput, pain-free big data pipelines.
☆29Mar 11, 2017Updated 9 years ago
Alternatives and similar repositories for yap
Users that are interested in yap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Railroadtracks is a Python package to handle connected computation steps for DNA and RNA Seq.☆14Jun 22, 2015Updated 10 years ago
- A tool for Read Multi-Mapper Resolution☆24Feb 15, 2017Updated 9 years ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11May 21, 2026Updated 3 weeks ago
- Next generation sequencing (NGS/HTS) tools.☆19Jan 25, 2024Updated 2 years ago
- Python wrapper around the popular ChIP-Seq peak caller SICER☆15Dec 7, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Perl extension and collection of utilities for Next-Generation Sequencing (NGS) data analysis☆23Oct 31, 2025Updated 7 months ago
- Manage the visualization of large amounts of other people's [often messy] genomics data☆18Apr 10, 2016Updated 10 years ago
- Temporal Pathway Synthesizer☆17Jun 28, 2024Updated last year
- The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data☆32Feb 20, 2018Updated 8 years ago
- [Historical] Reproducible Analyses for Bioinformatics☆106Mar 11, 2019Updated 7 years ago
- OntoBrowser is a web-based application for managing ontologies☆46Feb 15, 2023Updated 3 years ago
- WALT is a read mapping program for bisulfite sequencing DNA methylation studies.☆17Aug 23, 2022Updated 3 years ago
- An ultra fast and accurate paired-end adapter trimmer that needs no a priori adapter sequences.☆22Jan 19, 2021Updated 5 years ago
- De novo assembly based variant calling pipeline for Illumina short reads☆110Nov 30, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- RNF framework for NGS: simulation of reads, evaluation of mappers, conversion of RNF-compliant data.☆14Nov 10, 2025Updated 7 months ago
- EXPERIMENTAL implementation of side graph☆10Apr 16, 2015Updated 11 years ago
- R package to quickly obtain count vectors from indexed bam files☆15May 21, 2026Updated 3 weeks ago
- ☆22Jan 13, 2017Updated 9 years ago
- Build components for CloudMan, Galaxy on the Cloud, or Galaxy Server☆20Jun 27, 2017Updated 8 years ago
- Parse sql - with sql!☆25Jan 30, 2026Updated 4 months ago
- ☆12Feb 19, 2017Updated 9 years ago
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆401May 13, 2026Updated 3 weeks ago
- yaha: a flexible, sensitive and accurate DNA alignment tool designed to find optimal split-read mappings on single-end queries from 100bp…☆20Dec 6, 2017Updated 8 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- (DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER☆31Nov 21, 2018Updated 7 years ago
- fast webservices based query tool for large sets of genomic features☆26May 10, 2025Updated last year
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Jul 3, 2021Updated 4 years ago
- Computational Framework to reconstructing tumor clone structures☆15Mar 31, 2021Updated 5 years ago
- Consensus assembly and variant calling workflow.☆12May 26, 2015Updated 11 years ago
- A collection of well-known bioinformatics programs.☆25Apr 24, 2015Updated 11 years ago
- GEMTools main repository☆17Jun 21, 2022Updated 3 years ago
- 💣 Multiplayer minesweeper in your web browser☆13Mar 6, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Ontology Based Profile Matching☆17May 20, 2022Updated 4 years ago
- Earth Mover's Distance based Similarity Join on Hadoop☆12Mar 9, 2016Updated 10 years ago
- ☆11Sep 27, 2016Updated 9 years ago
- Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel☆28May 14, 2025Updated last year
- Toil workflows for common genomic pipelines☆33Oct 3, 2019Updated 6 years ago
- FlexLM integration for GridEngine☆18Nov 26, 2013Updated 12 years ago
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago