hbctraining / DGE_workshopLinks
☆404Updated 3 years ago
Alternatives and similar repositories for DGE_workshop
Users that are interested in DGE_workshop are comparing it to the libraries listed below
Sorting:
- A repository for setting up a RNAseq workflow☆448Updated 8 years ago
- Intro to ChIPseq using HPC☆318Updated 2 years ago
- Collections of library structure and sequence of popular single cell genomic methods☆487Updated 7 months ago
- ☆211Updated 4 months ago
- ☆442Updated 5 years ago
- Differential expression of RNA-seq data using the Negative Binomial☆428Updated 3 weeks ago
- Bioinformatics one liners from Ming Tang☆500Updated 5 years ago
- RNA-seq workflow using STAR and DESeq2☆350Updated this week
- Materials for short, half-day workshops☆341Updated last month
- GWAS Tutorial for Beginners☆353Updated 2 months ago
- ENCODE ATAC-seq pipeline☆438Updated last year
- GTEx & TOPMed data production and analysis pipelines☆390Updated 3 months ago
- Tools for handling Unique Molecular Identifiers in NGS data sets☆535Updated 5 months ago
- A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS…☆534Updated 3 months ago
- ChIP-seq analysis notes from Ming Tang☆836Updated last year
- Application for making ENCODE Blacklists☆332Updated 4 years ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆174Updated 4 years ago
- A tool to find sequencing data and metadata from public databases.☆591Updated last year
- ENCODE ChIP-seq pipeline☆275Updated last year
- MACS -- Model-based Analysis of ChIP-Seq☆764Updated 3 weeks ago
- A tool to map bisulfite converted sequence reads and determine cytosine methylation states☆439Updated 4 months ago
- Customizable workflows based on snakemake and python for the analysis of NGS data☆395Updated this week
- Tools to process and analyze deep sequencing data.☆747Updated 4 months ago
- Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.☆481Updated 5 months ago
- HiC-Pro: An optimized and flexible pipeline for Hi-C data processing☆429Updated last year
- RSEM: accurate quantification of gene and isoform expression from RNA-Seq data☆455Updated last year
- ☆363Updated last year
- A curated and summarized list of bioinformatics bench-marking papers and resources.☆349Updated last month
- Quick mining and visualization of NGS data by integrating genomic databases☆268Updated 2 years ago
- ☆635Updated 2 weeks ago