☆74Jan 13, 2022Updated 4 years ago
Alternatives and similar repositories for DGE_workshop_salmon
Users that are interested in DGE_workshop_salmon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆221May 28, 2026Updated last month
- ☆414Jan 13, 2022Updated 4 years ago
- ☆23Jul 27, 2023Updated 2 years ago
- R package with Shiny application for DGE analysis☆12Jan 8, 2024Updated 2 years ago
- A collection of R functions to aid in host-pathogen genomic research☆12May 8, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- materials and website for the 2016 kallisto sleuth workshop☆11Nov 7, 2016Updated 9 years ago
- BLADE: Bayesian Log-normAl DEconvolution for enhanced in silico microdissection of bulk gene expression data☆29Apr 3, 2024Updated 2 years ago
- Short course describing the considerations for a successful RNA-seq experiment☆19Mar 20, 2026Updated 4 months ago
- Querying cellular states and programs by learning representations of gene sets☆16Nov 2, 2025Updated 8 months ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- Nextflow pipeline that runs DESeq2 on data processed with the nextflow RNAseq pipeline☆13Dec 2, 2025Updated 7 months ago
- ☆24Apr 17, 2026Updated 3 months ago
- Snakefiles for common RNA-seq data analysis workflows (STAR and Kallisto).☆95Jul 18, 2017Updated 9 years ago
- A common data format and inference environment for single-cell trajectories 📦☆19Mar 31, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆23Jun 28, 2024Updated 2 years ago
- Co-expression network management based on WGCNA + k-means☆22May 11, 2021Updated 5 years ago
- Intro to ChIPseq using HPC☆324Jan 30, 2023Updated 3 years ago
- This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster☆173Mar 23, 2021Updated 5 years ago
- Metagenomics/viromics pipeline that focuses on automation, user-friendliness and a clear audit trail. Jovian aims to empower classical bi…☆18Sep 1, 2023Updated 2 years ago
- Browser for ExAC consortium data☆12Oct 23, 2017Updated 8 years ago
- Granular Functional Filtering (Gruffi) to isolate stressed cells☆14Nov 7, 2024Updated last year
- ☆37Feb 1, 2022Updated 4 years ago
- Galaxy Docker Image for the HiCExplorer☆11Mar 3, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- CALDER is a Hi-C analysis tool that allows: (1) compute chromatin domains from whole chromosome contacts; (2) derive their non-linear hie…☆27Apr 16, 2025Updated last year
- Utility functions for FACETS☆40Oct 24, 2025Updated 8 months ago
- ZGA prokaryotic genome assembly and annotation pipeline☆13Sep 13, 2024Updated last year
- Material for the RNAseq course☆10Aug 8, 2019Updated 6 years ago
- digitalDLSorteR: An R package to deconvolute bulk RNA-Seq using scRNA-Seq data☆16Oct 31, 2024Updated last year
- Publication Page for the Noack et al. 2021 Nature Neuroscience paper☆10Feb 7, 2022Updated 4 years ago
- A Tidy Framework to Hack Gene Expression Signatures☆21Apr 20, 2025Updated last year
- Detection of PatIent-Level distances from single cell genomics and pathomics data with Optimal Transport (PILOT)☆26Jun 12, 2026Updated last month
- This RNAseq data analysis tutorial is created for educational purpose☆34Feb 18, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆36Dec 6, 2017Updated 8 years ago
- Toolbox for single-cell data analysis on sample level☆25Updated this week
- This is a pipeline for variant annotation in the diagnosis of rare genetic disorders. It relies on open source data and has instructions …☆18Mar 20, 2023Updated 3 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆14Feb 29, 2020Updated 6 years ago
- ☆23Sep 6, 2016Updated 9 years ago
- ☆614Mar 23, 2021Updated 5 years ago