hbctraining / scRNA-seqLinks
☆563Updated 4 years ago
Alternatives and similar repositories for scRNA-seq
Users that are interested in scRNA-seq are comparing it to the libraries listed below
Sorting:
- ☆595Updated last month
- Analysis of single cell RNA-seq data course☆675Updated 3 years ago
- ChIP-seq analysis notes from Ming Tang☆802Updated 9 months ago
- A list of scRNA-seq analysis tools☆703Updated last week
- A repository for setting up a RNAseq workflow☆431Updated 8 years ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆500Updated last year
- ☆309Updated 5 years ago
- scripts and notebooks from sanbomics☆409Updated 6 months ago
- ☆392Updated 3 years ago
- Collections of library structure and sequence of popular single cell genomic methods☆465Updated 2 weeks ago
- Inferring CNV from Single-Cell RNA-Seq☆616Updated 4 months ago
- RNAseq analysis notes from Ming Tang☆1,013Updated 3 years ago
- pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which…☆505Updated last year
- Intro to ChIPseq using HPC☆307Updated 2 years ago
- NicheNet: predict active ligand-target links between interacting cells☆540Updated last week
- By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline☆325Updated 6 years ago
- ENCODE ATAC-seq pipeline☆418Updated 10 months ago
- R package for detecting doublets in single-cell RNA sequencing data☆468Updated 2 months ago
- Papers with code for single cell related papers☆286Updated last year
- Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq an…☆1,480Updated 2 years ago
- ☆443Updated 4 years ago
- A unified interface to immune deconvolution methods (CIBERSORT, EPIC, quanTIseq, TIMER, xCell, MCPcounter) and mouse deconvolution method…☆488Updated 3 weeks ago
- Table of software for the analysis of single-cell RNA-seq data.☆324Updated this week
- An overview of algorithms for estimating pseudotime in single-cell RNA-seq data☆425Updated 2 weeks ago
- R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics☆411Updated last month
- Analysis of single cell RNA-seq data course☆136Updated 2 years ago
- List of software packages for multi-omics analysis☆798Updated last month
- ☆386Updated last week
- https://www.sc-best-practices.org☆915Updated this week
- 单细胞分析的中文pipeline☆214Updated last year