Statistical Analysis of RNA-Seq Tools
☆109Oct 9, 2025Updated 7 months ago
Alternatives and similar repositories for SARTools
Users that are interested in SARTools are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Power analysis is essential to optimize the design of RNA-seq experiments and to assess and compare the power to detect differentially ex…☆107Aug 1, 2023Updated 2 years ago
- Differential analysis of RNA-Seq☆312May 28, 2025Updated 11 months ago
- Normalization and difference calling for Next Generation Sequencing (NGS) data via joint multinomial modeling.☆11Oct 8, 2021Updated 4 years ago
- A versatile and efficient RNA-Seq read counting tool☆16Mar 30, 2016Updated 10 years ago
- ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps☆23Oct 12, 2017Updated 8 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A web application framework for analysis and visualization of High throughput Sequencing metagenomic data☆10Nov 21, 2016Updated 9 years ago
- Tool for RNA-Seq analysis.☆40Apr 1, 2022Updated 4 years ago
- GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF☆19Oct 30, 2020Updated 5 years ago
- RNA seq analysis using Bioconductor (analysis built on limma, edgeR)☆12Sep 23, 2022Updated 3 years ago
- Sequana: a set of Snakemake NGS pipelines☆151Apr 15, 2026Updated last month
- R package for bcbio RNA-seq analysis.☆64Sep 9, 2024Updated last year
- GEO RNA-seq Experiments Processing Pipeline☆22Oct 25, 2019Updated 6 years ago
- NOTE: This package has been renamed to sparrow and will be submitted to Bioconductor 3.14. Please use that package instead. This is kept …☆23Nov 16, 2020Updated 5 years ago
- fastqcr: Quality Control of Sequencing Data☆77Aug 3, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.☆69Mar 19, 2026Updated 2 months ago
- Rcount: simple and flexible RNA-Seq read counting☆12May 19, 2022Updated 4 years ago
- Fast fusion detection using kallisto☆80Jun 11, 2025Updated 11 months ago
- The START App: R Shiny Transcriptome Analysis Resource Tool☆87Nov 11, 2020Updated 5 years ago
- Metagenomic AnalySis with QUantitative pipEline☆12Apr 24, 2019Updated 7 years ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Apr 16, 2026Updated last month
- RNASeq pipeline☆36Oct 28, 2019Updated 6 years ago
- Applying IDR analysis to Homer peaks.☆15May 8, 2020Updated 6 years ago
- SeqPlots - An interactive tool for visualizing NGS signals and sequence motif densities along genomic features using average plots and he…☆87May 11, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Gordon's Text utils Library☆10Apr 11, 2022Updated 4 years ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆166Oct 2, 2025Updated 7 months ago
- Table of software for the analysis of single-cell RNA-seq data.☆339May 14, 2026Updated last week
- Blacktie: a streamlined interface to the popular tophat/cufflinks RNA-seq pipeline☆26Oct 5, 2015Updated 10 years ago
- RNAseq analysis notes from Ming Tang☆1,086Nov 15, 2021Updated 4 years ago
- Northern Arizona SNP Pipeline☆20Oct 29, 2024Updated last year
- An analysis of Arabidopsis RNA-seq data (hy5 mutant and wt, two replicates each; SRA accession SRX029582)☆16Jul 3, 2012Updated 13 years ago
- Pipeline for Illumina shotgun sequencing of 16S rRNA amplicon sequences☆14Sep 2, 2016Updated 9 years ago
- ☆62Mar 23, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…☆1,422May 31, 2023Updated 2 years ago
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 9 years ago
- Transcript quantification import for modular pipelines☆145Apr 15, 2026Updated last month
- Biomark Fluidigm qPCR data set: processing and analysis☆11Apr 8, 2024Updated 2 years ago
- Color blindness friendly visualization of single-cell and bulk RNA-sequencing data☆215Dec 10, 2025Updated 5 months ago
- Experiments for "Scaling read aligners to hundreds of threads on general-purpose processors"☆11Jun 8, 2018Updated 7 years ago
- An R package to plot interactive three-way differential expression analysis☆38Jan 14, 2026Updated 4 months ago